RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 TMTC3Q6ZXV5 915 aa23.49■■□□□ 1.35
APOE-203ENST00000434152 SRBD1Q8N5C6 995 aaKnown RBP23.49■■□□□ 1.35
APOE-203ENST00000434152 BRF1Q92994 677 aa23.49■■□□□ 1.35
APOE-203ENST00000434152 RRP36Q96EU6 259 aaKnown RBP23.49■■□□□ 1.35
APOE-203ENST00000434152 UPF3AQ9H1J1 476 aaKnown RBP23.49■■□□□ 1.35
APOE-203ENST00000434152 SPC25Q9HBM1 224 aa23.49■■□□□ 1.35
APOE-203ENST00000434152 STARD7Q9NQZ5 370 aa23.49■■□□□ 1.35
APOE-203ENST00000434152 BAZ2BQ9UIF8 2168 aaKnown RBP23.49■■□□□ 1.35
APOE-203ENST00000434152 CCDC196A0A1B0GTZ2 297 aa23.48■■□□□ 1.35
APOE-203ENST00000434152 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.48■■□□□ 1.35
APOE-203ENST00000434152 PQBP1O60828 265 aaKnown RBP23.48■■□□□ 1.35
APOE-203ENST00000434152 RXRAP19793 462 aa23.48■■□□□ 1.35
APOE-203ENST00000434152 RTN1Q16799 776 aa23.48■■□□□ 1.35
APOE-203ENST00000434152 ADD3Q9UEY8 706 aaKnown RBP23.48■■□□□ 1.35
APOE-203ENST00000434152 PCDHA1Q9Y5I3 950 aa23.48■■□□□ 1.35
APOE-203ENST00000434152 CTAGE5O15320 804 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 PPP1R11O60927 126 aaPredicted RBP23.47■■□□□ 1.35
APOE-203ENST00000434152 PLEKHA8P1O95397 391 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 ASGR1P07306 291 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 CLTBP09497 229 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 ITGB8P26012 769 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 TNFAIP2Q03169 654 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 BAATQ14032 418 aaPredicted RBP23.47■■□□□ 1.35
APOE-203ENST00000434152 GNASQ5JWF2 1037 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 HOMER1Q86YM7 354 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 PCSK9Q8NBP7 692 aaKnown RBP23.47■■□□□ 1.35
APOE-203ENST00000434152 DNERQ8NFT8 737 aa23.47■■□□□ 1.35
APOE-203ENST00000434152 PTPDC1A2A3K4 754 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 GOLGA8AA7E2F4 631 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 GOLGA8BA8MQT2 603 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 RPS6P62753 249 aaKnown RBP23.46■■□□□ 1.35
APOE-203ENST00000434152 NKX3-2P78367 333 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 APOBRQ0VD83 1088 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 SHHQ15465 462 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 NOL8Q76FK4 1167 aaKnown RBP23.46■■□□□ 1.35
APOE-203ENST00000434152 Q7L0L9 218 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 ANKRD33Q7Z3H0 272 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 DEFB123Q8N688 67 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 MORC4Q8TE76 937 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 GLT1D1Q96MS3 346 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 TOX2Q96NM4 488 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 PDGFCQ9NRA1 345 aa23.46■■□□□ 1.35
APOE-203ENST00000434152 SEC63Q9UGP8 760 aaKnown RBP23.46■■□□□ 1.35
APOE-203ENST00000434152 ELP1O95163 1332 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 KIAA0355O15063 1070 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 METAP2P50579 478 aaKnown RBP eCLIP23.45■■□□□ 1.34
APOE-203ENST00000434152 FAAP100Q0VG06 881 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 TOB2Q14106 344 aaPredicted RBP23.45■■□□□ 1.34
APOE-203ENST00000434152 TAPT1Q6NXT6 567 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 EEPD1Q7L9B9 569 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 VTI1AQ96AJ9 217 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 ZNF274Q96GC6 653 aaPredicted RBP23.45■■□□□ 1.34
APOE-203ENST00000434152 UPF3BQ9BZI7 483 aaKnown RBP23.45■■□□□ 1.34
APOE-203ENST00000434152 FAM217BQ9NTX9 383 aaPredicted RBP23.45■■□□□ 1.34
APOE-203ENST00000434152 PDRG1Q9NUG6 133 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 TMEM39AQ9NV64 488 aa23.45■■□□□ 1.34
APOE-203ENST00000434152 GNEQ9Y223 722 aaKnown RBP23.45■■□□□ 1.34
APOE-203ENST00000434152 SMPD1P17405 629 aa23.44■■□□□ 1.34
APOE-203ENST00000434152 CDK7P50613 346 aa23.44■■□□□ 1.34
APOE-203ENST00000434152 BEX3Q00994 111 aa23.44■■□□□ 1.34
APOE-203ENST00000434152 FUT2Q10981 343 aa23.44■■□□□ 1.34
APOE-203ENST00000434152 C9orf50Q5SZB4 431 aa23.44■■□□□ 1.34
APOE-203ENST00000434152 MPHOSPH6Q99547 160 aaKnown RBP23.44■■□□□ 1.34
APOE-203ENST00000434152 MCM3APO60318 1980 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 DCDC2CA8MYV0 355 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 B4DLN1 442 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 OPLAHO14841 1288 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 PTGS1P23219 599 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 HSD17B4P51659 736 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 MRPL12P52815 198 aaKnown RBP23.43■■□□□ 1.34
APOE-203ENST00000434152 TMEM63BQ5T3F8 832 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 IQSEC1Q6DN90 963 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 SLC30A10Q6XR72 485 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 RAB11FIP4Q86YS3 637 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 TEX2Q8IWB9 1127 aa23.43■■□□□ 1.34
APOE-203ENST00000434152 FBXO16Q8IX29 292 aaPredicted RBP23.43■■□□□ 1.34
APOE-203ENST00000434152 CNTNAP5Q8WYK1 1306 aa23.42■■□□□ 1.34
APOE-203ENST00000434152 DYNC1LI2O43237 492 aaPredicted RBP23.42■■□□□ 1.34
APOE-203ENST00000434152 RAG1P15918 1043 aa23.42■■□□□ 1.34
APOE-203ENST00000434152 CALML3P27482 149 aa23.42■■□□□ 1.34
APOE-203ENST00000434152 PDIA3P30101 505 aaKnown RBP23.42■■□□□ 1.34
APOE-203ENST00000434152 CDC27P30260 824 aa23.42■■□□□ 1.34
APOE-203ENST00000434152 ALDH5A1P51649 535 aaPredicted RBP23.42■■□□□ 1.34
APOE-203ENST00000434152 ANKRD1Q15327 319 aa23.42■■□□□ 1.34
APOE-203ENST00000434152 LRRC37A2A6NM11 1700 aa23.42■■□□□ 1.34
APOE-203ENST00000434152 hCG_1984214I3L0E3 225 aa23.41■■□□□ 1.34
APOE-203ENST00000434152 ARVCFO00192 962 aa23.41■■□□□ 1.34
APOE-203ENST00000434152 TLK2Q86UE8 772 aa23.41■■□□□ 1.34
APOE-203ENST00000434152 CMTR1Q8N1G2 835 aaKnown RBP23.41■■□□□ 1.34
APOE-203ENST00000434152 ZNF713Q8N859 430 aaPredicted RBP23.41■■□□□ 1.34
APOE-203ENST00000434152 IL27Q8NEV9 243 aa23.41■■□□□ 1.34
APOE-203ENST00000434152 SYTL5Q8TDW5 730 aaPredicted RBP23.41■■□□□ 1.34
APOE-203ENST00000434152 VTA1Q9NP79 307 aa23.41■■□□□ 1.34
APOE-203ENST00000434152 MTMR10Q9NXD2 777 aa23.41■■□□□ 1.34
APOE-203ENST00000434152 EDNRBP24530 442 aa23.4■■□□□ 1.34
APOE-203ENST00000434152 ADD1P35611 737 aaKnown RBP23.4■■□□□ 1.34
APOE-203ENST00000434152 RBM25P49756 843 aaKnown RBP23.4■■□□□ 1.34
APOE-203ENST00000434152 EPHB4P54760 987 aa23.4■■□□□ 1.34
APOE-203ENST00000434152 TBC1D5Q92609 795 aa23.4■■□□□ 1.34
APOE-203ENST00000434152 AP5M1Q9H0R1 490 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms