RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 RAG1P15918 1043 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 HSD17B4P51659 736 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 GHRHRQ02643 423 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 SLC43A3Q8NBI5 491 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 SCFD2Q8WU76 684 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 TMEM87BQ96K49 555 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 IWS1Q96ST2 819 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 MYL10Q9BUA6 226 aa25.7■■□□□ 1.7
SEMA3B-205ENST00000434030 PNMA6FA0A0J9YX94 578 aa25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 SH2B2O14492 632 aaPredicted RBP25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 NKRFO15226 690 aaKnown RBP eCLIP25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 CDC45O75419 566 aa25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 PPP2R5BQ15173 497 aa25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 FAM126BQ8IXS8 530 aa25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 TMTC2Q8N394 836 aa25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 OR6J1Q8NGC5 347 aa25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 MAP3K20Q9NYL2 800 aaKnown RBP25.69■■□□□ 1.7
SEMA3B-205ENST00000434030 GRIN2DO15399 1336 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 DDAH1O94760 285 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 TXNP10599 105 aaKnown RBP25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 TRAF1Q13077 416 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 ITGA7Q13683 1181 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 ARHGEF16Q5VV41 709 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 SAMD3Q8N6K7 520 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 COPS5Q92905 334 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 TBX21Q9UL17 535 aa25.68■■□□□ 1.7
SEMA3B-205ENST00000434030 SCN10AQ9Y5Y9 1956 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 LIFRP42702 1097 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 TTLL4Q14679 1199 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 SHHQ15465 462 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 STXBP2Q15833 593 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 RNF20Q5VTR2 975 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 NFXL1Q6ZNB6 911 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 CTCFLQ8NI51 663 aaPredicted RBP25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 PXMP2Q9NR77 195 aa25.67■■□□□ 1.7
SEMA3B-205ENST00000434030 CCDC69A6NI79 296 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 TLR3O15455 904 aaKnown RBP25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 ARIH2O95376 493 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 TIMP1P01033 207 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 CD4P01730 458 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 EIF2AK2P19525 551 aaKnown RBP25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 KIF5BP33176 963 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 CPT1AP50416 773 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 PSMC6P62333 389 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 C9orf50Q5SZB4 431 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 GPR153Q6NV75 609 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 CCDC62Q6P9F0 684 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 SEPT14Q6ZU15 432 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 LRRC2Q9BYS8 371 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 POLR3EQ9NVU0 708 aa25.66■■□□□ 1.7
SEMA3B-205ENST00000434030 NR3C2P08235 984 aa25.65■■□□□ 1.7
SEMA3B-205ENST00000434030 SMARCA1P28370 1054 aa25.65■■□□□ 1.7
SEMA3B-205ENST00000434030 HOXA13P31271 388 aaPredicted RBP25.65■■□□□ 1.7
SEMA3B-205ENST00000434030 PURAQ00577 322 aaKnown RBP25.65■■□□□ 1.7
SEMA3B-205ENST00000434030 PIBF1Q8WXW3 757 aa25.65■■□□□ 1.7
SEMA3B-205ENST00000434030 SPZ1Q9BXG8 430 aa25.65■■□□□ 1.7
SEMA3B-205ENST00000434030 SEZ6LQ9BYH1 1024 aa25.65■■□□□ 1.7
SEMA3B-205ENST00000434030 EPHB4P54760 987 aa25.64■■□□□ 1.7
SEMA3B-205ENST00000434030 NEK1Q96PY6 1258 aa25.64■■□□□ 1.7
SEMA3B-205ENST00000434030 A6NJR5 290 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 EIF3JO75822 258 aaKnown RBP25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 MYL3P08590 195 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 FPGSQ05932 587 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 LY6KQ17RY6 165 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 TSGA10IPQ3SY00 556 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 BRDTQ58F21 947 aaPredicted RBP25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 RASEFQ8IZ41 740 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 LZTS2Q9BRK4 669 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 PDCD2LQ9BRP1 358 aa25.63■■□□□ 1.69
SEMA3B-205ENST00000434030 GCOM1H8Y6P7 765 aaPredicted RBP25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 POLR2MP0CAP2 368 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 CALM1P0DP23 149 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 CALM2P0DP24 149 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 CALM3P0DP25 149 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 RXRAP19793 462 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 GNAQP50148 359 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 MFSD5Q6N075 450 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 SRBD1Q8N5C6 995 aaKnown RBP25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 RRP36Q96EU6 259 aaKnown RBP25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 SLC12A7Q9Y666 1083 aa25.62■■□□□ 1.69
SEMA3B-205ENST00000434030 LAMA2P24043 3122 aaKnown RBP25.61■■□□□ 1.69
SEMA3B-205ENST00000434030 PLEKHA8P1O95397 391 aa25.61■■□□□ 1.69
SEMA3B-205ENST00000434030 MYCLP12524 364 aaPredicted RBP25.61■■□□□ 1.69
SEMA3B-205ENST00000434030 ADCK5Q3MIX3 580 aa25.61■■□□□ 1.69
SEMA3B-205ENST00000434030 SGMS1Q86VZ5 419 aa25.61■■□□□ 1.69
SEMA3B-205ENST00000434030 MTG1Q9BT17 334 aaPredicted RBP25.61■■□□□ 1.69
SEMA3B-205ENST00000434030 DDX41Q9UJV9 622 aaKnown RBP25.61■■□□□ 1.69
SEMA3B-205ENST00000434030 B4GALT4O60513 344 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 KPNA6O60684 536 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 GH1P01241 217 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 NEFLP07196 543 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 EXOSC10Q01780 885 aaKnown RBP25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 PGM5Q15124 567 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 FCHSD1Q86WN1 690 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 RAB11FIP4Q86YS3 637 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 CMTR1Q8N1G2 835 aaKnown RBP25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 PPP1R12CQ9BZL4 782 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 TRPV6Q9H1D0 765 aa25.6■■□□□ 1.69
SEMA3B-205ENST00000434030 ARHGAP1Q07960 439 aa25.59■■□□□ 1.69
SEMA3B-205ENST00000434030 DHX32Q7L7V1 743 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms