RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 TRIM59Q8IWR1 403 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 NAT16Q8N8M0 369 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 ANKS4BQ8N8V4 417 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 ABHD4Q8TB40 342 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 SIRPGQ9P1W8 387 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 TNFRSF10DQ9UBN6 386 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 DUOX2Q9NRD8 1548 aa8.23□□□□□ -1.09
HDAC9-213ENST00000433709 TNRQ92752 1358 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 ANKRD30AQ9BXX3 1397 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 EIF2AK4Q9P2K8 1649 aaKnown RBP8.22□□□□□ -1.09
HDAC9-213ENST00000433709 NCOA1Q15788 1441 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 CLTCQ00610 1675 aaKnown RBP8.22□□□□□ -1.09
HDAC9-213ENST00000433709 A2ML1A8K2U0 1454 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 PZPP20742 1482 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 IQSEC2Q5JU85 1478 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 NLRP1Q9C000 1473 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 C2orf71A6NGG8 1288 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 FADS2P1A8MWK0 482 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 EFEMP2O95967 443 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 KIR2DL1P43626 348 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-213ENST00000433709 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-213ENST00000433709 GALK1P51570 392 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 CHRNEQ04844 493 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 ANKLE2Q86XL3 938 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 CRACR2BQ8N4Y2 399 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-213ENST00000433709 BTN2A2Q8WVV5 523 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 EPN3Q9H201 632 aa8.22□□□□□ -1.09
HDAC9-213ENST00000433709 ERBINQ96RT1 1412 aa8.21□□□□□ -1.09
HDAC9-213ENST00000433709 PSPNO60542 156 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 RTP1P59025 263 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 NR0B2Q15466 257 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 SLC14A2Q15849 920 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 KCNMB1Q16558 191 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 RCSD1Q6JBY9 416 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 ZSWIM9Q86XI8 627 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 FAM168AQ92567 244 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 PTCHD1Q96NR3 888 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 BACE2Q9Y5Z0 518 aa8.21□□□□□ -1.1
HDAC9-213ENST00000433709 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.1
HDAC9-213ENST00000433709 FGD6Q6ZV73 1430 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 CEP170BQ9Y4F5 1589 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-213ENST00000433709 A0A1W2PQU0 124 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 PDPK1O15530 556 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 SEPHS1P49903 392 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 KIR3DS1Q14943 382 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 SF1Q15637 639 aaKnown RBP8.2□□□□□ -1.1
HDAC9-213ENST00000433709 TMEM67Q5HYA8 995 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 SOGA3Q5TF21 947 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 ST13P5Q8NFI4 369 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-213ENST00000433709 JMJD8Q96S16 334 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 PLCD4Q9BRC7 762 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 RNF32Q9H0A6 362 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 CCDC113Q9H0I3 377 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 GPRC5CQ9NQ84 441 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 GPR160Q9UJ42 338 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 CAMSAP1Q5T5Y3 1602 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 KIF15Q9NS87 1388 aa8.2□□□□□ -1.1
HDAC9-213ENST00000433709 TCOF1Q13428 1488 aaKnown RBP8.19□□□□□ -1.1
HDAC9-213ENST00000433709 ZNF142P52746 1687 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-213ENST00000433709 FAM221BA6H8Z2 402 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 AGRPO00253 132 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 GRIA2P42262 883 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 CYP4F3Q08477 520 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 SCRN1Q12765 414 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 HSF5Q4G112 596 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-213ENST00000433709 EEF1DP3Q658K8 133 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 SPATC1Q76KD6 591 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 SLCO6A1Q86UG4 719 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 LILRA2Q8N149 483 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 UBXN4Q92575 508 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 DAPK1P53355 1430 aa8.19□□□□□ -1.1
HDAC9-213ENST00000433709 MYO3AQ8NEV4 1616 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 RNF17Q9BXT8 1623 aaKnown RBP8.18□□□□□ -1.1
HDAC9-213ENST00000433709 PTPN23Q9H3S7 1636 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 ZNF503-AS2A6NEH8 195 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 NRDCO43847 1150 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 GLI1P08151 1106 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 PPP2R2AP63151 447 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 RASGRF1Q13972 1273 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 RASA3Q14644 834 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 SIRT2Q8IXJ6 389 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 COPS5Q92905 334 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 SHISA4Q96DD7 197 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 ASIC4Q96FT7 647 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 LIN37Q96GY3 246 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-213ENST00000433709 DEPDC7Q96QD5 511 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 PFDN2Q9UHV9 154 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-213ENST00000433709 ABCC5O15440 1437 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 ARHGAP31Q2M1Z3 1444 aa8.18□□□□□ -1.1
HDAC9-213ENST00000433709 STRCQ7RTU9 1775 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 A0A1W2PQ45 241 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-213ENST00000433709 A0A1W2PQY0 241 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 CAPNS1P04632 268 aa8.17□□□□□ -1.1
HDAC9-213ENST00000433709 FAM50AQ14320 339 aaKnown RBP8.17□□□□□ -1.1
HDAC9-213ENST00000433709 HLA-DQA1Q5Y7H0 255 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms