RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 UBR1Q8IWV7 1749 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 RAD51CO43502 376 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 NMT2O60551 498 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 CLTAP09496 248 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 SCTRP47872 440 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 ITIH3Q06033 890 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 FAM114A1Q8IWE2 563 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.372e-6■□□□□ 10.2
HMGCS1-202ENST00000433297 TRIM6Q9C030 488 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 ACTR5Q9H9F9 607 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 CYP7A1P22680 504 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 PEX19P40855 299 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 ACCSLQ4AC99 568 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 GLE1Q53GS7 698 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 NAALADL2Q58DX5 795 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 ANKRD20A8PQ5CZ79 823 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 WLSQ5T9L3 541 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 GIMAP8Q8ND71 665 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 LPIN2Q92539 896 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 TACO1Q9BSH4 297 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 BUB1BO60566 1050 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 CCNE1P24864 410 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 CDC25CP30307 473 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 NPY5RQ15761 445 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 C6orf89Q6UWU4 347 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 ISCA1Q9BUE6 129 aa12.75□□□□□ -0.37
HMGCS1-202ENST00000433297 BICDL2A1A5D9 508 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 KLRC4O43908 158 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 HSD17B3P37058 310 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 PLCB4Q15147 1175 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 KIF6Q6ZMV9 814 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 RUBCNQ92622 972 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 HVCN1Q96D96 273 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 AP1M1Q9BXS5 423 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 GOLPH3Q9H4A6 298 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 TRMT112Q9UI30 125 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 FAM170AA1A519 330 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 BCAMP50895 628 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 SEC23AQ15436 765 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 FAM47AQ5JRC9 791 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 GKAP1Q5VSY0 366 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 PPP4R3AQ6IN85 833 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 MDM1Q8TC05 714 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 DHTKD1Q96HY7 919 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 FAXDC2Q96IV6 333 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 TMEM60Q9H2L4 133 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 NDST4Q9H3R1 872 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 CCDC194A0A1B0GVG4 234 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 KCNK3O14649 394 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 MAGOHP61326 146 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 CCDC50Q8IVM0 306 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 WHAMMQ8TF30 809 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 TAF4BQ92750 862 aa12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 MAGOHBQ96A72 148 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-202ENST00000433297 DCDC2CA8MYV0 355 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 RHOBTB3O94955 611 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 CSF1RP07333 972 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 SCG2P13521 617 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 FUT2Q10981 343 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 MYO1EQ12965 1108 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 IRS4O14654 1257 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 GCKP35557 465 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 IFFO1Q0D2I5 559 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 INF2Q27J81 1249 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 KRT71Q3SY84 523 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 VWA3BQ502W6 1294 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 FMNL3Q8IVF7 1028 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 RSRC1Q96IZ7 334 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 TRIM31Q9BZY9 425 aa12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 CNOT8Q9UFF9 292 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 MYO5AQ9Y4I1 1855 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-202ENST00000433297 SMIM23A6NLE4 172 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 SLC8A1P32418 973 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 CRYMQ14894 314 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 HLFQ16534 295 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TBC1D1Q86TI0 1168 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 DNAAF5Q86Y56 855 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 MYH13Q9UKX3 1938 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 L3MBTL1Q9Y468 752 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 PPP1R12AO14974 1030 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 TRAPPC3O43617 180 aa12.72□□□□□ -0.37
HMGCS1-202ENST00000433297 CEP104O60308 925 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms