RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDX56-205ENST00000433257 ANKS1AQ92625 1134 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 MTRQ99707 1265 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 LRRC27Q9C0I9 530 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 SUGCTQ9HAC7 445 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 SNX12Q9UMY4 172 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 GDAQ9Y2T3 454 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
DDX56-205ENST00000433257 GOLGB1Q14789 3259 aaKnown RBP16.42■□□□□ 0.22
DDX56-205ENST00000433257 PES1O00541 588 aaKnown RBP16.42■□□□□ 0.22
DDX56-205ENST00000433257 EBAG9O00559 213 aa16.42■□□□□ 0.22
DDX56-205ENST00000433257 LCA5LO95447 670 aa16.42■□□□□ 0.22
DDX56-205ENST00000433257 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
DDX56-205ENST00000433257 CHRNDQ07001 517 aa16.42■□□□□ 0.22
DDX56-205ENST00000433257 SDR42E1Q8WUS8 393 aa16.42■□□□□ 0.22
DDX56-205ENST00000433257 C7orf25Q9BPX7 421 aa16.42■□□□□ 0.22
DDX56-205ENST00000433257 JADE2Q9NQC1 790 aa16.42■□□□□ 0.22
DDX56-205ENST00000433257 LCMT1Q9UIC8 334 aa16.42■□□□□ 0.22
DDX56-205ENST00000433257 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
DDX56-205ENST00000433257 CDC25AP30304 524 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 NOP2P46087 812 aaKnown RBP16.41■□□□□ 0.22
DDX56-205ENST00000433257 MTIF2P46199 727 aaKnown RBP16.41■□□□□ 0.22
DDX56-205ENST00000433257 ICE2Q659A1 982 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 B4GALNT4Q76KP1 1039 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 RNF10Q8N5U6 811 aaKnown RBP16.41■□□□□ 0.22
DDX56-205ENST00000433257 CAVIN3Q969G5 261 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 TMX4Q9H1E5 349 aaPredicted RBP16.41■□□□□ 0.22
DDX56-205ENST00000433257 KAT14Q9H8E8 782 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 ANKRD31Q8N7Z5 1873 aa16.41■□□□□ 0.22
DDX56-205ENST00000433257 SRRM3A6NNA2 597 aaPredicted RBP16.4■□□□□ 0.22
DDX56-205ENST00000433257 KLRC4O43908 158 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 TADA2BQ86TJ2 420 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 SUGP1Q8IWZ8 645 aaKnown RBP16.4■□□□□ 0.22
DDX56-205ENST00000433257 C1orf131Q8NDD1 294 aaKnown RBP16.4■□□□□ 0.22
DDX56-205ENST00000433257 STAMQ92783 540 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
DDX56-205ENST00000433257 SH3GL2Q99962 352 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 NOC4LQ9BVI4 516 aaKnown RBP16.4■□□□□ 0.22
DDX56-205ENST00000433257 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 PLAGL2Q9UPG8 496 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
DDX56-205ENST00000433257 TRIM66O15016 1216 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 PJA2O43164 708 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 HSF2BPO75031 334 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 PHACTR2O75167 634 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 GGCXP38435 758 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 SKOR1P84550 965 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 IL17AQ16552 155 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 CCDC181Q5TID7 509 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 KRT25Q7Z3Z0 450 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 CNOT6LQ96LI5 555 aaKnown RBP16.4■□□□□ 0.22
DDX56-205ENST00000433257 DEF6Q9H4E7 631 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 MYH1P12882 1939 aa16.4■□□□□ 0.22
DDX56-205ENST00000433257 B4DLN1 442 aa16.39■□□□□ 0.21
DDX56-205ENST00000433257 BBOX1O75936 387 aa16.39■□□□□ 0.21
DDX56-205ENST00000433257 ABL1P00519 1130 aa16.39■□□□□ 0.21
DDX56-205ENST00000433257 MICALCLQ6ZW33 695 aa16.39■□□□□ 0.21
DDX56-205ENST00000433257 CAPS2Q9BXY5 557 aa16.39■□□□□ 0.21
DDX56-205ENST00000433257 PVALEFA0A1B0GWK0 134 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 SSU72P8A0A1W2PR75 194 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 WNT7AO00755 349 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 ENC1O14682 589 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 ZEB2O60315 1214 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 GRM4Q14833 912 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 IFT20Q8IY31 132 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 EIF1ADQ8N9N8 165 aaKnown RBP16.38■□□□□ 0.21
DDX56-205ENST00000433257 IFIH1Q9BYX4 1025 aaKnown RBP16.38■□□□□ 0.21
DDX56-205ENST00000433257 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
DDX56-205ENST00000433257 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
DDX56-205ENST00000433257 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
DDX56-205ENST00000433257 GRID2IPA4D2P6 1211 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 M0R2N6 131 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
DDX56-205ENST00000433257 LRRC63Q05C16 580 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 GRAPQ13588 217 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 SPTY2D1Q68D10 685 aaPredicted RBP16.37■□□□□ 0.21
DDX56-205ENST00000433257 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
DDX56-205ENST00000433257 CALML4Q96GE6 196 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 CAPZA3Q96KX2 299 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 DUSP9Q99956 384 aaKnown RBP16.37■□□□□ 0.21
DDX56-205ENST00000433257 BSDC1Q9NW68 430 aaPredicted RBP16.37■□□□□ 0.21
DDX56-205ENST00000433257 STIM2Q9P246 746 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 HDAC6Q9UBN7 1215 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 TRIM10Q9UDY6 481 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 UTRNP46939 3433 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 TRIM49BA6NDI0 452 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 USP17L12C9JPN9 530 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 USP17L21D6R901 530 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 hCG_1984214I3L0E3 225 aa16.37■□□□□ 0.21
DDX56-205ENST00000433257 EIF3HO15372 352 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■□□□□ 11.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms