RNA–Protein interactions for RNA: ENST00000431480.6

TBC1D4-204, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-204ENST00000431480 PCDHA1Q9Y5I3 950 aa19.67■□□□□ 0.74
TBC1D4-204ENST00000431480 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
TBC1D4-204ENST00000431480 SNX1Q13596 522 aa19.67■□□□□ 0.74
TBC1D4-204ENST00000431480 SCYL3Q8IZE3 742 aa19.67■□□□□ 0.74
TBC1D4-204ENST00000431480 DCAF15Q66K64 600 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 PPP1R13BQ96KQ4 1090 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 RTEL1Q9NZ71 1219 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 PPWD1Q96BP3 646 aaKnown RBP19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 HMGB1P1B2RPK0 211 aaPredicted RBP19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 GNGT2O14610 69 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 SRGAP2BP0DMP2 458 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 ACTN1P12814 892 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 MAGED2Q9UNF1 606 aaPredicted RBP19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 ATP2B4P23634 1241 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 SLC12A1Q13621 1099 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 ZKSCAN8Q15776 578 aaPredicted RBP19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 ASXL2Q76L83 1435 aa19.66■□□□□ 0.74
TBC1D4-204ENST00000431480 GOLGA8QA0A0J9YX86 632 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 GOLGA8OA6NCC3 632 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 GOLGA8NF8WBI6 632 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 PDIA3P30101 505 aaKnown RBP19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 MAPK4P31152 587 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 IFT88Q13099 833 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 TMTC3Q6ZXV5 915 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 NUB1Q9Y5A7 615 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 APBA3O96018 575 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 SCRN1Q12765 414 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 NR2F2P24468 414 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 PABPC4Q13310 644 aaKnown RBP eCLIP19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 IQCB1Q15051 598 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 LRCH2Q5VUJ6 765 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 ZNF653Q96CK0 615 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 CDC23Q9UJX2 597 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 GOLGA8FQ08AF8 430 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 GOLGA8DPQ0D2H9 430 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 TFDP1Q14186 410 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 TBC1D10BQ4KMP7 808 aaPredicted RBP19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 LRRC24Q50LG9 513 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 TRIM4Q9C037 500 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 BCS1LQ9Y276 419 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 ANKRD20A4Q4UJ75 823 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 ANKRD20A8PQ5CZ79 823 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 ANKRD20A2Q5SQ80 823 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 ANKRD20A1Q5TYW2 823 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 GPT2Q8TD30 523 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 SPZ1Q9BXG8 430 aa19.65■□□□□ 0.74
TBC1D4-204ENST00000431480 EVI5O60447 810 aa19.64■□□□□ 0.74
TBC1D4-204ENST00000431480 XPAP23025 273 aaPredicted RBP19.64■□□□□ 0.74
TBC1D4-204ENST00000431480 PSPC1Q8WXF1 523 aaKnown RBP19.64■□□□□ 0.74
TBC1D4-204ENST00000431480 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.74
TBC1D4-204ENST00000431480 ZNF500O60304 480 aaPredicted RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 SLC4A1P02730 911 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 PKP1Q13835 747 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 BBS5Q8N3I7 341 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 SSH3Q8TE77 659 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 EPS15L1Q9UBC2 864 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 LRRD1A4D1F6 860 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 EIF3CLB5ME19 914 aaKnown RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 CPP00450 1065 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 UBXN2AP68543 259 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 TMED2Q15363 201 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 RSRC2Q7L4I2 434 aaKnown RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 CCNYQ8ND76 341 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 LARP4BQ92615 738 aaKnown RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 FAM149B1Q96BN6 582 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 EIF3CQ99613 913 aaKnown RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 EPB41L5Q9HCM4 733 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 ZMYND10O75800 440 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 SEC31AO94979 1220 aaKnown RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 ABCB5Q2M3G0 1257 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 TCP11X2Q5H9J9 407 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 CYP4F22Q6NT55 531 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 PARD3BQ8TEW8 1205 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 ANKRD36BP1Q96IX9 119 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 MAGEF1Q9HAY2 307 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 DAAM1Q9Y4D1 1078 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 KIF24Q5T7B8 1368 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 SPDYE2BA6NHP3 402 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 SPDYE6P0CI01 402 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 RYBPQ8N488 228 aaPredicted RBP19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 USP44Q9H0E7 712 aa19.64■□□□□ 0.73
TBC1D4-204ENST00000431480 APOEP02649 317 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 PTPREP23469 700 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 CHRNDQ07001 517 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 KIF22Q14807 665 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 ZBTB38Q8NAP3 1195 aaPredicted RBP19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 FIS1Q9Y3D6 152 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 PSMC2P35998 433 aaKnown RBP19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 SGO2Q562F6 1265 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 RABGGTAQ92696 567 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 TBX22Q9Y458 520 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 ERVV-2B6SEH9 535 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 CDR2Q01850 454 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 ATP8A1Q9Y2Q0 1164 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 FOSP01100 380 aaPredicted RBP19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 RPSAP08865 295 aaKnown RBP19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 PLTPP55058 493 aa19.63■□□□□ 0.73
TBC1D4-204ENST00000431480 RBL2Q08999 1139 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms