RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 ZBTB5O15062 677 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 CYTH3O43739 400 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 PGK1P00558 417 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 TIMP1P01033 207 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 ZNF865P0CJ78 1059 aaPredicted RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 CALML3P27482 149 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 GNAQP50148 359 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 MAMDC4Q6UXC1 1216 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 SLC30A10Q6XR72 485 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 RNF207Q6ZRF8 634 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 C16orf59Q7L2K0 433 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 MTMR8Q96EF0 704 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 PURBQ96QR8 312 aaKnown RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 GAS2L1Q99501 681 aaPredicted RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 TSEN34Q9BSV6 310 aaKnown RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 ZHX1Q9UKY1 873 aaPredicted RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
PTCD1-204ENST00000430982 SYNGAP1Q96PV0 1343 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 REV3LO60673 3130 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 XIRP2A4UGR9 3374 aa17.62■□□□□ 0.41
PTCD1-204ENST00000430982 KLF18A0A0U1RQI7 1052 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 SNAI1O95863 264 aaPredicted RBP17.61■□□□□ 0.41
PTCD1-204ENST00000430982 RPS6KB1P23443 525 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
PTCD1-204ENST00000430982 ADGRE1Q14246 886 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 TMEM240Q5SV17 173 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 CCSAPQ6IQ19 270 aaPredicted RBP17.61■□□□□ 0.41
PTCD1-204ENST00000430982 MFSD5Q6N075 450 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 Q6ZUG5 572 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 ARMCX2Q7L311 632 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 BRPF3Q9ULD4 1205 aa17.61■□□□□ 0.41
PTCD1-204ENST00000430982 ASB14A6NK59 587 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 ZBTB43O43298 467 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 PPP1R11O60927 126 aaPredicted RBP17.6■□□□□ 0.41
PTCD1-204ENST00000430982 PBX2P40425 430 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 ACLYP53396 1101 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 RPS6P62753 249 aaKnown RBP17.6■□□□□ 0.41
PTCD1-204ENST00000430982 MRPS5P82675 430 aaKnown RBP17.6■□□□□ 0.41
PTCD1-204ENST00000430982 CMTR1Q8N1G2 835 aaKnown RBP17.6■□□□□ 0.41
PTCD1-204ENST00000430982 SRBD1Q8N5C6 995 aaKnown RBP17.6■□□□□ 0.41
PTCD1-204ENST00000430982 FANCBQ8NB91 859 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 KLHDC9Q8NEP7 349 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 UHRF1Q96T88 793 aaPredicted RBP17.6■□□□□ 0.41
PTCD1-204ENST00000430982 SPZ1Q9BXG8 430 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
PTCD1-204ENST00000430982 PNMA6FA0A0J9YX94 578 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 MOXD2PA6NHM9 499 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 GOLGA8AA7E2F4 631 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 GOLGA8BA8MQT2 603 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 DCDC2CA8MYV0 355 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 EIF5BO60841 1220 aaKnown RBP17.59■□□□□ 0.41
PTCD1-204ENST00000430982 AKR1A1P14550 325 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 APOBRQ0VD83 1088 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 RTN1Q16799 776 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 MCF2L2Q86YR7 1114 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 CCDC82Q8N4S0 544 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 TBC1D5Q92609 795 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 BRF1Q92994 677 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 FAM122AQ96E09 287 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 RRP36Q96EU6 259 aaKnown RBP17.59■□□□□ 0.41
PTCD1-204ENST00000430982 PRDM12Q9H4Q4 367 aa17.59■□□□□ 0.41
PTCD1-204ENST00000430982 ADD3Q9UEY8 706 aaKnown RBP17.59■□□□□ 0.41
PTCD1-204ENST00000430982 DDX49Q9Y6V7 483 aaKnown RBP17.59■□□□□ 0.41
PTCD1-204ENST00000430982 ASTN1O14525 1302 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 CST5P28325 142 aaPredicted RBP17.58■□□□□ 0.4
PTCD1-204ENST00000430982 SMARCA1P28370 1054 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 CDK7P50613 346 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 ALDH5A1P51649 535 aaPredicted RBP17.58■□□□□ 0.4
PTCD1-204ENST00000430982 TRAF1Q13077 416 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 ACVR2BQ13705 512 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 TMTC3Q6ZXV5 915 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 RGS22Q8NE09 1264 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 LENG1Q96BZ8 264 aaPredicted RBP17.58■□□□□ 0.4
PTCD1-204ENST00000430982 ABHD16BQ9H3Z7 469 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 STARD7Q9NQZ5 370 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
PTCD1-204ENST00000430982 SEC63Q9UGP8 760 aaKnown RBP17.58■□□□□ 0.4
PTCD1-204ENST00000430982 CYP46A1Q9Y6A2 500 aa17.58■□□□□ 0.4
PTCD1-204ENST00000430982 GRXCR1A8MXD5 290 aa17.57■□□□□ 0.4
PTCD1-204ENST00000430982 CFBP00751 764 aa17.57■□□□□ 0.4
PTCD1-204ENST00000430982 PPIGQ13427 754 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTCD1-204ENST00000430982 RUFY3Q7L099 469 aa17.57■□□□□ 0.4
PTCD1-204ENST00000430982 UPF3BQ9BZI7 483 aaKnown RBP17.57■□□□□ 0.4
PTCD1-204ENST00000430982 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
PTCD1-204ENST00000430982 FAM184BQ9ULE4 1060 aa17.57■□□□□ 0.4
PTCD1-204ENST00000430982 ARIH1Q9Y4X5 557 aaPredicted RBP17.57■□□□□ 0.4
PTCD1-204ENST00000430982 TRANK1O15050 2925 aa17.57■□□□□ 0.4
PTCD1-204ENST00000430982 MYO9BQ13459 2157 aa17.56■□□□□ 0.4
PTCD1-204ENST00000430982 ELP1O95163 1332 aa17.56■□□□□ 0.4
PTCD1-204ENST00000430982 MROH7Q68CQ1 1323 aa17.56■□□□□ 0.4
PTCD1-204ENST00000430982 EEPD1Q7L9B9 569 aa17.56■□□□□ 0.4
PTCD1-204ENST00000430982 FBXO16Q8IX29 292 aaPredicted RBP17.56■□□□□ 0.4
PTCD1-204ENST00000430982 SYTL5Q8TDW5 730 aaPredicted RBP17.56■□□□□ 0.4
PTCD1-204ENST00000430982 PPM1EQ8WY54 764 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms