RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PSTPIP2Q9H939 334 aa13.92□□□□□ -0.18
CPNE4-201ENST00000429747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.18
CPNE4-201ENST00000429747 ADAMTS1Q9UHI8 967 aa13.92□□□□□ -0.18
CPNE4-201ENST00000429747 NFU1Q9UMS0 254 aa13.92□□□□□ -0.18
CPNE4-201ENST00000429747 FRMD4BQ9Y2L6 1034 aa13.92□□□□□ -0.18
CPNE4-201ENST00000429747 DLG5Q8TDM6 1919 aa13.92□□□□□ -0.18
CPNE4-201ENST00000429747 NCK2O43639 380 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
CPNE4-201ENST00000429747 FCER1AP12319 257 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 PDCLQ13371 301 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 DGKHQ86XP1 1220 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 FAM133AQ8N9E0 248 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 EHMT1Q9H9B1 1298 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 SAMD15Q9P1V8 674 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 NNTQ13423 1086 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 FAM98CQ17RN3 349 aaKnown RBP13.91□□□□□ -0.18
CPNE4-201ENST00000429747 CCDC174Q6PII3 467 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
CPNE4-201ENST00000429747 CDCA7Q9BWT1 371 aaPredicted RBP13.91□□□□□ -0.18
CPNE4-201ENST00000429747 PLVAPQ9BX97 442 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 ESYT3A0FGR9 886 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 GNA14O95837 355 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 GTF2IP78347 998 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 TCP10Q12799 353 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 PPP1R7Q15435 360 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 GRIPAP1Q4V328 841 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 CCDC91Q7Z6B0 441 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 UHMK1Q8TAS1 419 aaKnown RBP13.91□□□□□ -0.18
CPNE4-201ENST00000429747 STIM2Q9P246 746 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 CTTNBP2NLQ9P2B4 639 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 MINPP1Q9UNW1 487 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 C1orf167Q5SNV9 1468 aa13.91□□□□□ -0.18
CPNE4-201ENST00000429747 SPOPO43791 374 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 CALCOCO2Q13137 446 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 PRR16Q569H4 304 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 EFCAB13Q8IY85 973 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 MYCT1Q8N699 235 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 COG1Q8WTW3 980 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 ZNF512BQ96KM6 892 aaPredicted RBP13.9□□□□□ -0.18
CPNE4-201ENST00000429747 NAP1L4Q99733 375 aaKnown RBP13.9□□□□□ -0.18
CPNE4-201ENST00000429747 A0A1W2PRG0 241 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 SASH3O75995 380 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 H2AFZP0C0S5 128 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 ZNF18P17022 549 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 ERVK-24P63145 666 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 CCDC93Q567U6 631 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 H2AFVQ71UI9 128 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 FBXL16Q8N461 479 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 A0A087WUV0 522 aaPredicted RBP13.9□□□□□ -0.18
CPNE4-201ENST00000429747 IFT88Q13099 833 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 E2F4Q16254 413 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 GJA10Q969M2 543 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
CPNE4-201ENST00000429747 CAPN11Q9UMQ6 739 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 MEGF6O75095 1541 aa13.9□□□□□ -0.18
CPNE4-201ENST00000429747 POTEMA6NI47 508 aa13.9□□□□□ -0.19
CPNE4-201ENST00000429747 BMP6P22004 513 aa13.9□□□□□ -0.19
CPNE4-201ENST00000429747 NR2F2P24468 414 aa13.9□□□□□ -0.19
CPNE4-201ENST00000429747 STAT1P42224 750 aa13.9□□□□□ -0.19
CPNE4-201ENST00000429747 BEND6Q5SZJ8 279 aaPredicted RBP13.9□□□□□ -0.19
CPNE4-201ENST00000429747 ADSSL1Q8N142 457 aa13.9□□□□□ -0.19
CPNE4-201ENST00000429747 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.19
CPNE4-201ENST00000429747 FAM217BQ9NTX9 383 aaPredicted RBP13.9□□□□□ -0.19
CPNE4-201ENST00000429747 ANO9A1A5B4 782 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 H3BQF6 201 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 SLC16A2P36021 539 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 NAP1L3Q99457 506 aaPredicted RBP13.89□□□□□ -0.19
CPNE4-201ENST00000429747 TMEM47Q9BQJ4 181 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 AMFRQ9UKV5 643 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 ATP6V0A2Q9Y487 856 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
CPNE4-201ENST00000429747 GFPT1Q06210 699 aaPredicted RBP13.89□□□□□ -0.19
CPNE4-201ENST00000429747 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPNE4-201ENST00000429747 UBE2SQ16763 222 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 SRLQ86TD4 932 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 A0A1W2PQC6 194 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 MAGEA9P43362 315 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 SEL1L2Q5TEA6 688 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 PNMA8AQ86V59 439 aaPredicted RBP13.89□□□□□ -0.19
CPNE4-201ENST00000429747 STK17AQ9UEE5 414 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 ITIH6Q6UXX5 1313 aa13.89□□□□□ -0.19
CPNE4-201ENST00000429747 EXOC3O60645 756 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 CTNNA2P26232 953 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
CPNE4-201ENST00000429747 FAM84BQ96KN1 310 aaPredicted RBP13.88□□□□□ -0.19
CPNE4-201ENST00000429747 STMN4Q9H169 189 aaPredicted RBP13.88□□□□□ -0.19
CPNE4-201ENST00000429747 KANSL2Q9H9L4 492 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 RIC8AQ9NPQ8 531 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 INTS13Q9NVM9 706 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 KDM3AQ9Y4C1 1321 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 CYP2J2P51589 502 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 SYCE1Q8N0S2 351 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms