RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 MMS19Q96T76 1030 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 UBA5Q9GZZ9 404 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 SLC39A2Q9NP94 309 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 BLOC1S4Q9NUP1 217 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 PSD3Q9NYI0 1048 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 USP17L5A8MUK1 530 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 PLCG2P16885 1265 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 TXKP42681 527 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 USP14P54578 494 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 RHBDL3P58872 404 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 SV2BQ7L1I2 683 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 PURBQ96QR8 312 aaKnown RBP14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 RIOX1Q9H6W3 641 aa14.84□□□□□ -0.03
SNRNP200-202ENST00000429650 N4BP1O75113 896 aaKnown RBP14.83□□□□□ -0.03
SNRNP200-202ENST00000429650 UFL1O94874 794 aa14.83□□□□□ -0.03
SNRNP200-202ENST00000429650 VPS72Q15906 364 aa14.83□□□□□ -0.03
SNRNP200-202ENST00000429650 FKBP15Q5T1M5 1219 aa14.83□□□□□ -0.03
SNRNP200-202ENST00000429650 MYMKA6NI61 221 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 IL1R1P14778 569 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 CYP27A1Q02318 531 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 CALCRLQ16602 461 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 PNMA5Q96PV4 448 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 VPS18Q9P253 973 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 STK17AQ9UEE5 414 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 DUSP10Q9Y6W6 482 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 NHSQ6T4R5 1651 aa14.83□□□□□ -0.04
SNRNP200-202ENST00000429650 hCG_1984214I3L0E3 225 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 PDHBP11177 359 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 FXR2P51116 673 aaKnown RBP eCLIP14.82□□□□□ -0.043e-8■■■□□ 17
SNRNP200-202ENST00000429650 VAV2P52735 878 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 UNC13DQ70J99 1090 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 ZNF713Q8N859 430 aaPredicted RBP14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 LRWD1Q9UFC0 647 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 FRMPD2Q68DX3 1309 aaPredicted RBP14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 ANO9A1A5B4 782 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 LRRIQ3A6PVS8 624 aaPredicted RBP14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 ZNF263O14978 683 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 SLC37A4O43826 429 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 EDIL3O43854 480 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 CKAP4Q07065 602 aaKnown RBP14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 TRAPPC3LQ5T215 181 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 LARP4BQ92615 738 aaKnown RBP14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 IQCDQ96DY2 449 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 FAM163AQ96GL9 167 aaPredicted RBP14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 RPGRIP1Q96KN7 1286 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 CAPZA3Q96KX2 299 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 SIK3Q9Y2K2 1263 aa14.82□□□□□ -0.04
SNRNP200-202ENST00000429650 PVALEFA0A1B0GWK0 134 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 ATP2B4P23634 1241 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 HNRNPH3P31942 346 aaKnown RBP14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 VWA3BQ502W6 1294 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 MFSD14BQ5SR56 506 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 ZBTB9Q96C00 473 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 FOCADQ5VW36 1801 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 GAKO14976 1311 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 MACROD2A1Z1Q3 448 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 TDP2O95551 362 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 PLEKP08567 350 aaPredicted RBP14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 LMAN1P49257 510 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 KIF5AQ12840 1032 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 PRR5LQ6MZQ0 368 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 COA7Q96BR5 231 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 CCDC42Q96M95 316 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 NDST4Q9H3R1 872 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 FAN1Q9Y2M0 1017 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 PLIN4Q96Q06 1357 aa14.81□□□□□ -0.04
SNRNP200-202ENST00000429650 CLGNO14967 610 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 EPHB6O15197 1021 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 ADCY7P51828 1080 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 TMEM266Q2M3C6 531 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 MUM1L1Q5H9M0 696 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 DYMQ7RTS9 669 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 KRT26Q7Z3Y9 468 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 GUF1Q8N442 669 aaKnown RBP14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 CDK5RAP3Q96JB5 506 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 TSGA10Q9BZW7 698 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 LY75O60449 1722 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 TARSL2A2RTX5 802 aaKnown RBP14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 POTEMA6NI47 508 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 ZNF185O15231 689 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 IDEP14735 1019 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 MCM3P25205 808 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 SPA17Q15506 151 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 MAN2A1Q16706 1144 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 C8orf37Q96NL8 207 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 MTMR4Q9NYA4 1195 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 ARHGAP20Q9P2F6 1191 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 ABCB11O95342 1321 aa14.8□□□□□ -0.04
SNRNP200-202ENST00000429650 PDE2AO00408 941 aaPredicted RBP14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 ASPRV1Q53RT3 343 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 SLF2Q8IX21 1173 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 LRRC47Q8N1G4 583 aaKnown RBP14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 FAM71BQ8TC56 605 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 RAD54LQ92698 747 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 CCDC102AQ96A19 550 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 NUDT12Q9BQG2 462 aa14.79□□□□□ -0.04
SNRNP200-202ENST00000429650 FAM207AQ9NSI2 230 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms