RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 AIFM3Q96NN9 605 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 PCDHA6Q9UN73 950 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 PCDHA8Q9Y5H6 950 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 RABL6Q3YEC7 729 aaPredicted RBP18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 C7orf31Q8N865 590 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 CSRNP2Q9H175 543 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 UBE2Q2LH0YL09 131 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 SLC9C1Q4G0N8 1177 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 SEL1L2Q5TEA6 688 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 RBM46Q8TBY0 533 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 LAD1O00515 517 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 GNAT1P11488 350 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 ADAM9Q13443 819 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 CTTNQ14247 550 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 ZNF280CQ8ND82 737 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 PARK7Q99497 189 aaKnown RBP18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 GSG1L2A8MUP6 293 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 EPHX2P34913 555 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 KLHL30Q0D2K2 578 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 PPM1KQ8N3J5 372 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 STIM2Q9P246 746 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 MYO1AQ9UBC5 1043 aa18.84■□□□□ 0.61
SMARCA4-203ENST00000429416 CYP2B6P20813 491 aa18.83■□□□□ 0.61
SMARCA4-203ENST00000429416 CATSPER4Q7RTX7 472 aa18.83■□□□□ 0.61
SMARCA4-203ENST00000429416 CCDC84Q86UT8 332 aaPredicted RBP18.83■□□□□ 0.61
SMARCA4-203ENST00000429416 ABCB11O95342 1321 aa18.83■□□□□ 0.61
SMARCA4-203ENST00000429416 CSF1RP07333 972 aa18.83■□□□□ 0.61
SMARCA4-203ENST00000429416 MAP2K1Q02750 393 aaPredicted RBP18.83■□□□□ 0.61
SMARCA4-203ENST00000429416 PPP1R7Q15435 360 aa18.83■□□□□ 0.61
SMARCA4-203ENST00000429416 GNA14O95837 355 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 GAS8O95995 478 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 FANCCQ00597 558 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 TXNDC16Q9P2K2 825 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 E7EVH7 732 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 MMP1P03956 469 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 VEGFAP15692 232 aaPredicted RBP18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 COG2Q14746 738 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 ENAHQ8N8S7 591 aaPredicted RBP18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 MTUS1Q9ULD2 1270 aa18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.83■□□□□ 0.6
SMARCA4-203ENST00000429416 MEGF6O75095 1541 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 CTAGE9A4FU28 777 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 ZNF569Q5MCW4 686 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 AGBL3Q8NEM8 1001 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 BAG1Q99933 345 aaPredicted RBP18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 PCDHA7Q9UN72 937 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 TNNC1P63316 161 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 NSMCE1Q8WV22 266 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 FAM151AQ8WW52 585 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 HHIPL2Q6UWX4 724 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 RRAGCQ9HB90 399 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 FAM169AQ9Y6X4 670 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 FLT1P17948 1338 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 CTAGE15A4D2H0 777 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 DDNO94850 711 aaPredicted RBP18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 CTAGE8P0CG41 777 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 LACTBP83111 547 aaPredicted RBP18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 TFAMQ00059 246 aaKnown RBP18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 TMTC3Q6ZXV5 915 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 CTAGE6Q86UF2 777 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 CTAGE4Q8IX94 777 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 ANKRD13AQ8IZ07 590 aa18.82■□□□□ 0.6
SMARCA4-203ENST00000429416 PIK3CAP42336 1068 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 IQCGQ9H095 443 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 ENTPD3O75355 529 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 LSM14BQ9BX40 385 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 RPN1P04843 607 aaKnown RBP18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 NT5C2P49902 561 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 GABPAQ06546 454 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 METTL23Q86XA0 190 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 BBXQ8WY36 941 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 DDX12PQ92771 950 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 FAM204AQ9H8W3 233 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 INPP5FQ9Y2H2 1132 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 GTPBP6O43824 516 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 KIAA0754O94854 1291 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 BRD1O95696 1058 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 QRICH1Q2TAL8 776 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 RRAGAQ7L523 313 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 FHDC1Q9C0D6 1143 aaPredicted RBP18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 PCIF1Q9H4Z3 704 aa18.81■□□□□ 0.6
SMARCA4-203ENST00000429416 SRGNP10124 158 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 CYB5R4Q7L1T6 521 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 CMA1P23946 247 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 TRIM14Q14142 442 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 CFAP58Q5T655 872 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 CLEC10AQ8IUN9 316 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 NUP58Q9BVL2 599 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 ADARB2Q9NS39 739 aaKnown RBP18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 RNASE9P60153 205 aaKnown RBP18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 AP3B2Q13367 1082 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 LRRC41Q15345 812 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 SCYL2Q6P3W7 929 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 CCDC25Q86WR0 208 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 ANKRD36BP1Q96IX9 119 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 SYNJ2BP-COX16A0A087WUM0 186 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 ECE1P42892 770 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 NECTIN1Q15223 517 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms