RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 SLF1Q9BQI6 1058 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 TSGA10Q9BZW7 698 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CTAGE15A4D2H0 777 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 TBC1D8O95759 1140 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CTAGE8P0CG41 777 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 MTIF2P46199 727 aaKnown RBP20.74■□□□□ 0.91
PDE6B-202ENST00000429163 DDR1Q08345 913 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 FAM182BQ5T319 152 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CTAGE6Q86UF2 777 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CTAGE4Q8IX94 777 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 SEPT12Q8IYM1 358 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 RAD54LQ92698 747 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CUL5Q93034 780 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CHP1Q99653 195 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 NOC4LQ9BVI4 516 aaKnown RBP20.74■□□□□ 0.91
PDE6B-202ENST00000429163 UBA5Q9GZZ9 404 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CPVLQ9H3G5 476 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 KDM3AQ9Y4C1 1321 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 NRXN2Q9P2S2 1712 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 B4DLN1 442 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 TXKP42681 527 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 FKBP1AP62942 108 aaKnown RBP20.73■□□□□ 0.91
PDE6B-202ENST00000429163 SLC51AQ86UW1 340 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 KIAA0895Q8NCT3 520 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 PNMA5Q96PV4 448 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 PLIN2Q99541 437 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 ZC3H12CQ9C0D7 883 aaKnown RBP20.73■□□□□ 0.91
PDE6B-202ENST00000429163 NT5C3AQ9H0P0 336 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 MYO6Q9UM54 1294 aa20.73■□□□□ 0.91
PDE6B-202ENST00000429163 REXO2Q9Y3B8 237 aaKnown RBP20.73■□□□□ 0.91
PDE6B-202ENST00000429163 ANO9A1A5B4 782 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 AKR1B1P15121 316 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 EHHADHQ08426 723 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 MIIPQ5JXC2 388 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 TEX2Q8IWB9 1127 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 JMJD4Q9H9V9 463 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 ZBTB5O15062 677 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 NPM3O75607 178 aaKnown RBP20.72■□□□□ 0.91
PDE6B-202ENST00000429163 NPR1P16066 1061 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 ALDH1B1P30837 517 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 PAPD7Q5XG87 772 aaKnown RBP20.72■□□□□ 0.91
PDE6B-202ENST00000429163 MOXD1Q6UVY6 613 aa20.72■□□□□ 0.91
PDE6B-202ENST00000429163 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
PDE6B-202ENST00000429163 MCM3P25205 808 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 MAN2A1Q16706 1144 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 TRAPPC11Q7Z392 1133 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 MYMKA6NI61 221 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 PES1O00541 588 aaKnown RBP20.71■□□□□ 0.91
PDE6B-202ENST00000429163 ADGRF4Q8IZF3 695 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 TXLNBQ8N3L3 684 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 MKL1Q969V6 931 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 FUT8Q9BYC5 575 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 DHX36Q9H2U1 1008 aaKnown RBP20.71■□□□□ 0.91
PDE6B-202ENST00000429163 SEMA6BQ9H3T3 888 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 TMEM260Q9NX78 707 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 PLAGL2Q9UPG8 496 aa20.71■□□□□ 0.91
PDE6B-202ENST00000429163 MAP2K7O14733 419 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 EDIL3O43854 480 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 FCER1AP12319 257 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 SHMT1P34896 483 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 HDLBPQ00341 1268 aaKnown RBP20.7■□□□□ 0.9
PDE6B-202ENST00000429163 VWA3BQ502W6 1294 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 TEKT1Q969V4 418 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 PURBQ96QR8 312 aaKnown RBP20.7■□□□□ 0.9
PDE6B-202ENST00000429163 TSG101Q99816 390 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 ANKZF1Q9H8Y5 726 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 USP40Q9NVE5 1235 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 STK24Q9Y6E0 443 aa20.7■□□□□ 0.9
PDE6B-202ENST00000429163 FRMPD2Q68DX3 1309 aaPredicted RBP20.7■□□□□ 0.9
PDE6B-202ENST00000429163 A0A0U1RQJ8 604 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 USP11P51784 963 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 HERVK_113P62684 666 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 CKAP4Q07065 602 aaKnown RBP20.69■□□□□ 0.9
PDE6B-202ENST00000429163 SNX29Q8TEQ0 813 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 ATRIPQ8WXE1 791 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 COA7Q96BR5 231 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 RASSF10A6NK89 507 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 SLC37A4O43826 429 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 GPS2Q13227 327 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 LONRF2Q1L5Z9 754 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 CCDC122Q5T0U0 273 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 WDR93Q6P2C0 686 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 LRRC47Q8N1G4 583 aaKnown RBP20.69■□□□□ 0.9
PDE6B-202ENST00000429163 NLGN1Q8N2Q7 840 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 DCAF4Q8WV16 495 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 TMX4Q9H1E5 349 aaPredicted RBP20.69■□□□□ 0.9
PDE6B-202ENST00000429163 NHEJ1Q9H9Q4 299 aaPredicted RBP20.69■□□□□ 0.9
PDE6B-202ENST00000429163 DDX4Q9NQI0 724 aaKnown RBP20.69■□□□□ 0.9
PDE6B-202ENST00000429163 BMP2KQ9NSY1 1161 aaPredicted RBP20.69■□□□□ 0.9
PDE6B-202ENST00000429163 ATF5Q9Y2D1 282 aaPredicted RBP20.69■□□□□ 0.9
PDE6B-202ENST00000429163 AFF2P51816 1311 aa20.69■□□□□ 0.9
PDE6B-202ENST00000429163 LCA5LO95447 670 aa20.68■□□□□ 0.9
PDE6B-202ENST00000429163 TDP2O95551 362 aa20.68■□□□□ 0.9
PDE6B-202ENST00000429163 PICALMQ13492 652 aa20.68■□□□□ 0.9
PDE6B-202ENST00000429163 MCM6Q14566 821 aa20.68■□□□□ 0.9
PDE6B-202ENST00000429163 TAF3Q5VWG9 929 aa20.68■□□□□ 0.9
PDE6B-202ENST00000429163 ZNF771Q7L3S4 317 aaPredicted RBP20.68■□□□□ 0.9
PDE6B-202ENST00000429163 NUCKS1Q9H1E3 243 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms