RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 CST5P28325 142 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 ACLYP53396 1101 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 RTP1P59025 263 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 PDE4DQ08499 809 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 TOB2Q14106 344 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 RTN1Q16799 776 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 DUSP28Q4G0W2 176 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 IQSEC1Q6DN90 963 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 TYW1BQ6NUM6 668 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 NOL8Q76FK4 1167 aaKnown RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 TLK2Q86UE8 772 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 FBXL16Q8N461 479 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 RRP36Q96EU6 259 aaKnown RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 WDR11Q9BZH6 1224 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 MAF1Q9H063 256 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 PXMP2Q9NR77 195 aa12.43□□□□□ -0.42
ATG4B-210ENST00000428861 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 GOLGA8AA7E2F4 631 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 GOLGA8BA8MQT2 603 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 GCOM1H8Y6P7 765 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-210ENST00000428861 MEIS2O14770 477 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 RGS20O76081 388 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 ASGR1P07306 291 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 POLR2MP0CAP2 368 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 TRIM60Q495X7 471 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 GNASQ5JWF2 1037 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 ARHGEF16Q5VV41 709 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 SYNE3Q6ZMZ3 975 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 RUFY3Q7L099 469 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 FCHSD1Q86WN1 690 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 NSUN6Q8TEA1 469 aaKnown RBP12.42□□□□□ -0.42
ATG4B-210ENST00000428861 GPKOWQ92917 476 aaPredicted RBP eCLIP12.42□□□□□ -0.42
ATG4B-210ENST00000428861 PDCD2LQ9BRP1 358 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
ATG4B-210ENST00000428861 UPF3BQ9BZI7 483 aaKnown RBP12.42□□□□□ -0.42
ATG4B-210ENST00000428861 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 NR2E3Q9Y5X4 410 aa12.42□□□□□ -0.42
ATG4B-210ENST00000428861 PPFIA3O75145 1194 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 NR3C2P08235 984 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 PSMA5P28066 241 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 FSCN1Q16658 493 aaKnown RBP12.41□□□□□ -0.42
ATG4B-210ENST00000428861 WWC2Q6AWC2 1192 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 SEPT14Q6ZU15 432 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 IWS1Q96ST2 819 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
ATG4B-210ENST00000428861 SEC63Q9UGP8 760 aaKnown RBP12.41□□□□□ -0.42
ATG4B-210ENST00000428861 NAP1L2Q9ULW6 460 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-210ENST00000428861 ATP11BQ9Y2G3 1177 aa12.41□□□□□ -0.42
ATG4B-210ENST00000428861 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 MYCLP12524 364 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-210ENST00000428861 PDIA3P30101 505 aaKnown RBP12.4□□□□□ -0.42
ATG4B-210ENST00000428861 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
ATG4B-210ENST00000428861 RCAN1P53805 252 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 EVCP57679 992 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 FGD1P98174 961 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 TLE2Q04725 743 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 PGM5Q15124 567 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 STXBP2Q15833 593 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 C1orf53Q5VUE5 145 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 CXCL17Q6UXB2 119 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 VSIG10LQ86VR7 867 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 TM6SF1Q9BZW5 370 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 STARD7Q9NQZ5 370 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.42
ATG4B-210ENST00000428861 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
ATG4B-210ENST00000428861 Q9Y3F1 56 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 V9GY48 417 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-210ENST00000428861 NID2Q14112 1375 aa12.4□□□□□ -0.42
ATG4B-210ENST00000428861 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 TRIM43BA6NCK2 446 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 ADAMTS3O15072 1205 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 EIF3JO75822 258 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 TXNP10599 105 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 ITGB8P26012 769 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 MAGEA10P43363 369 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 CCT2P78371 535 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 MRPS9P82933 396 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 TRAF1Q13077 416 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 NTRK3Q16288 839 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 UBE2SQ16763 222 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 HEATR3Q7Z4Q2 680 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 PCSK9Q8NBP7 692 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 SCFD2Q8WU76 684 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 TRIM43Q96BQ3 446 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 MPHOSPH6Q99547 160 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 AP5M1Q9H0R1 490 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 SPC25Q9HBM1 224 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms