RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 HERC4Q5GLZ8 1057 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 PUS3Q9BZE2 481 aaKnown RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 DEFB129Q9H1M3 183 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 LARSQ9P2J5 1176 aaKnown RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 HESX1Q9UBX0 185 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 SEPT9Q9UHD8 586 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 RIPOR2Q9Y4F9 1068 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 YDJCA8MPS7 323 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 EXOC3O60645 756 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 UPP2O95045 317 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 HOXC6P09630 235 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 TMEM191BP0C7N4 346 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 EPB41P11171 864 aaKnown RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 STXBP2Q15833 593 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 RABL6Q3YEC7 729 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 KCTD1Q719H9 257 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 URGCPQ8TCY9 931 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 KCNG4Q8TDN1 519 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 NRBP1Q9UHY1 535 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 VWA3AA6NCI4 1184 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 C19orf81C9J6K1 198 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 ATN1P54259 1190 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 YWHAEP62258 255 aaKnown RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 BMP2KLQ5H9B9 411 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 TWF2Q6IBS0 349 aaKnown RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 IFNL3Q8IZI9 196 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 SLF1Q9BQI6 1058 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 TRAF5O00463 557 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 CTAGE5O15320 804 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 IRF5Q13568 498 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 INF2Q27J81 1249 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 PROSER3Q2NL68 480 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 ASPRV1Q53RT3 343 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 CENPHQ9H3R5 247 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 ATP11BQ9Y2G3 1177 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 CBX1P83916 185 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 CREB3L3Q68CJ9 461 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 ST7Q9NRC1 585 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 ZNF70Q9UC06 446 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-206ENST00000428680 PTPN22Q9Y2R2 807 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 SPDYE16A6NNV3 312 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-206ENST00000428680 WNT10BO00744 389 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 PTPREP23469 700 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 PSMD2Q13200 908 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 SYDE2Q5VT97 1194 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 LUZP1Q86V48 1076 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 GPRC5AQ8NFJ5 357 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 KIFAP3Q92845 792 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 RNF146Q9NTX7 359 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 SH3BP5O60239 455 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 MARK3P27448 753 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 ZNF569Q5MCW4 686 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 MAK16Q9BXY0 300 aaKnown RBP8.03□□□□□ -1.12
CNOT4-206ENST00000428680 IKBKGQ9Y6K9 419 aa8.03□□□□□ -1.12
CNOT4-206ENST00000428680 ZNF646O15015 1829 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-206ENST00000428680 DYNC1LI2O43237 492 aaPredicted RBP8.02□□□□□ -1.12
CNOT4-206ENST00000428680 FDX1P10109 184 aa8.02□□□□□ -1.12
CNOT4-206ENST00000428680 PCP11498 1178 aaKnown RBP8.02□□□□□ -1.12
CNOT4-206ENST00000428680 SPAG1Q07617 926 aa8.02□□□□□ -1.12
CNOT4-206ENST00000428680 CC2D1AQ6P1N0 951 aaPredicted RBP8.02□□□□□ -1.12
CNOT4-206ENST00000428680 SPC24Q8NBT2 197 aa8.02□□□□□ -1.12
CNOT4-206ENST00000428680 FNDC3AQ9Y2H6 1198 aaKnown RBP8.02□□□□□ -1.12
CNOT4-206ENST00000428680 RABGAP1Q9Y3P9 1069 aa8.02□□□□□ -1.12
CNOT4-206ENST00000428680 CTNND1O60716 968 aaKnown RBP8.02□□□□□ -1.13
CNOT4-206ENST00000428680 ATP5JP18859 108 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 RAD51AP2Q09MP3 1159 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 CCDC14Q49A88 953 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 FBXO33Q7Z6M2 555 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 FMNL3Q8IVF7 1028 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-206ENST00000428680 PPP1R16BQ96T49 567 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 DCTPP1Q9H773 170 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 KIF9Q9HAQ2 790 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 TTLL3Q9Y4R7 772 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 hCG_1642624A0A1W2PR95 340 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 BICDL2A1A5D9 508 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 KRT9P35527 623 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 RGS2P41220 211 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 IFI16Q16666 785 aaKnown RBP8.02□□□□□ -1.13
CNOT4-206ENST00000428680 RILPL1Q5EBL4 403 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 BEND3Q5T5X7 828 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 TAF3Q5VWG9 929 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 PGBD3Q8N328 593 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 IPO4Q8TEX9 1081 aaKnown RBP8.02□□□□□ -1.13
CNOT4-206ENST00000428680 ZSCAN10Q96SZ4 725 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-206ENST00000428680 MYL10Q9BUA6 226 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 CETN3O15182 167 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 SLC16A2P36021 539 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 PAFAH1B1P43034 410 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 DMP1Q13316 513 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-206ENST00000428680 ISM2Q6H9L7 571 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 CCDC91Q7Z6B0 441 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 PCDHA12Q9UN75 941 aa8.02□□□□□ -1.13
CNOT4-206ENST00000428680 ANXA13P27216 316 aa8.01□□□□□ -1.13
CNOT4-206ENST00000428680 COG2Q14746 738 aa8.01□□□□□ -1.13
CNOT4-206ENST00000428680 ZNF654Q8IZM8 581 aa8.01□□□□□ -1.13
CNOT4-206ENST00000428680 PRPF38AQ8NAV1 312 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms