RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 SCN10AQ9Y5Y9 1956 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 OPLAHO14841 1288 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 B4GALT4O60513 344 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 PPP1R11O60927 126 aaPredicted RBP31.71■■■□□ 2.67
LMO1-202ENST00000428101 CYP2C18P33260 490 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 CHST3Q7LGC8 479 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 TMEM199Q8N511 208 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 AMNQ9BXJ7 453 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 KIAA1217Q5T5P2 1943 aa31.71■■■□□ 2.67
LMO1-202ENST00000428101 TXNP10599 105 aaKnown RBP31.7■■■□□ 2.67
LMO1-202ENST00000428101 GRM4Q14833 912 aa31.7■■■□□ 2.67
LMO1-202ENST00000428101 TMEM240Q5SV17 173 aa31.7■■■□□ 2.67
LMO1-202ENST00000428101 RALYLQ86SE5 291 aaKnown RBP31.7■■■□□ 2.67
LMO1-202ENST00000428101 RMDN3Q96TC7 470 aa31.7■■■□□ 2.67
LMO1-202ENST00000428101 A6NJR5 290 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 ZBTB5O15062 677 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 MYL3P08590 195 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 ANTXR2P58335 489 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 TTLL4Q14679 1199 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 CCDC62Q6P9F0 684 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 SLC17A8Q8NDX2 589 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 IWS1Q96ST2 819 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 ALDH8A1Q9H2A2 487 aaPredicted RBP31.69■■■□□ 2.66
LMO1-202ENST00000428101 SEMA6BQ9H3T3 888 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 HIPK3Q9H422 1215 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 RBM8AQ9Y5S9 174 aaKnown RBP31.69■■■□□ 2.66
LMO1-202ENST00000428101 UMODL1Q5DID0 1318 aa31.69■■■□□ 2.66
LMO1-202ENST00000428101 ERICH2A1L162 156 aa31.68■■■□□ 2.66
LMO1-202ENST00000428101 HSD17B4P51659 736 aa31.68■■■□□ 2.66
LMO1-202ENST00000428101 GHRHRQ02643 423 aa31.68■■■□□ 2.66
LMO1-202ENST00000428101 TROAPQ12815 778 aa31.68■■■□□ 2.66
LMO1-202ENST00000428101 WTAPQ15007 396 aa31.68■■■□□ 2.66
LMO1-202ENST00000428101 MB21D2Q8IYB1 491 aaPredicted RBP31.68■■■□□ 2.66
LMO1-202ENST00000428101 MTG1Q9BT17 334 aaPredicted RBP31.68■■■□□ 2.66
LMO1-202ENST00000428101 TTYH1Q9H313 450 aaPredicted RBP31.68■■■□□ 2.66
LMO1-202ENST00000428101 RIOX1Q9H6W3 641 aa31.68■■■□□ 2.66
LMO1-202ENST00000428101 CFBP00751 764 aa31.67■■■□□ 2.66
LMO1-202ENST00000428101 ACRP10323 421 aa31.67■■■□□ 2.66
LMO1-202ENST00000428101 IGDCC4Q8TDY8 1250 aa31.67■■■□□ 2.66
LMO1-202ENST00000428101 NOC4LQ9BVI4 516 aaKnown RBP31.67■■■□□ 2.66
LMO1-202ENST00000428101 STXBP2Q15833 593 aa31.66■■■□□ 2.66
LMO1-202ENST00000428101 BRDTQ58F21 947 aaPredicted RBP31.66■■■□□ 2.66
LMO1-202ENST00000428101 RASIP1Q5U651 963 aa31.66■■■□□ 2.66
LMO1-202ENST00000428101 ARHGEF16Q5VV41 709 aa31.66■■■□□ 2.66
LMO1-202ENST00000428101 SEPT14Q6ZU15 432 aa31.66■■■□□ 2.66
LMO1-202ENST00000428101 ZNF365Q70YC5 407 aa31.66■■■□□ 2.66
LMO1-202ENST00000428101 GPHNQ9NQX3 736 aaPredicted RBP31.66■■■□□ 2.66
LMO1-202ENST00000428101 PCDHA1Q9Y5I3 950 aa31.66■■■□□ 2.66
LMO1-202ENST00000428101 A0A0C4DFX4 3053 aa31.65■■■□□ 2.66
LMO1-202ENST00000428101 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.65■■■□□ 2.66
LMO1-202ENST00000428101 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.65■■■□□ 2.66
LMO1-202ENST00000428101 CYTH3O43739 400 aa31.65■■■□□ 2.66
LMO1-202ENST00000428101 EIF2AK2P19525 551 aaKnown RBP31.65■■■□□ 2.66
LMO1-202ENST00000428101 SART3Q15020 963 aaKnown RBP31.65■■■□□ 2.66
LMO1-202ENST00000428101 LY6KQ17RY6 165 aa31.65■■■□□ 2.66
LMO1-202ENST00000428101 IL23AQ9NPF7 189 aa31.65■■■□□ 2.66
LMO1-202ENST00000428101 PXMP2Q9NR77 195 aa31.65■■■□□ 2.66
LMO1-202ENST00000428101 TRMT13Q9NUP7 481 aaKnown RBP31.65■■■□□ 2.66
LMO1-202ENST00000428101 EYSQ5T1H1 3165 aa31.64■■■□□ 2.66
LMO1-202ENST00000428101 KPNA6O60684 536 aa31.64■■■□□ 2.66
LMO1-202ENST00000428101 NBPF20Q3BBV1 942 aa31.64■■■□□ 2.66
LMO1-202ENST00000428101 TMEM67Q5HYA8 995 aa31.64■■■□□ 2.66
LMO1-202ENST00000428101 HOMER1Q86YM7 354 aa31.64■■■□□ 2.66
LMO1-202ENST00000428101 PIGSQ96S52 555 aa31.64■■■□□ 2.66
LMO1-202ENST00000428101 CDX2Q99626 313 aaPredicted RBP31.64■■■□□ 2.66
LMO1-202ENST00000428101 LSG1Q9H089 658 aaKnown RBP31.64■■■□□ 2.66
LMO1-202ENST00000428101 WNT8AQ9H1J5 351 aa31.64■■■□□ 2.66
LMO1-202ENST00000428101 NR3C2P08235 984 aa31.63■■■□□ 2.65
LMO1-202ENST00000428101 CCL23P55773 120 aa31.63■■■□□ 2.65
LMO1-202ENST00000428101 PSRC1Q6PGN9 363 aaPredicted RBP31.63■■■□□ 2.65
LMO1-202ENST00000428101 EIF3JO75822 258 aaKnown RBP31.62■■■□□ 2.65
LMO1-202ENST00000428101 ARHGAP1Q07960 439 aa31.62■■■□□ 2.65
LMO1-202ENST00000428101 PPP1R13LQ8WUF5 828 aa31.62■■■□□ 2.65
LMO1-202ENST00000428101 ESYT1Q9BSJ8 1104 aa31.62■■■□□ 2.65
LMO1-202ENST00000428101 MAP3K20Q9NYL2 800 aaKnown RBP31.62■■■□□ 2.65
LMO1-202ENST00000428101 CATIPQ7Z7H3 387 aa31.61■■■□□ 2.65
LMO1-202ENST00000428101 SKAP1Q86WV1 359 aa31.61■■■□□ 2.65
LMO1-202ENST00000428101 SAMD3Q8N6K7 520 aa31.61■■■□□ 2.65
LMO1-202ENST00000428101 AFG1LQ8WV93 481 aa31.61■■■□□ 2.65
LMO1-202ENST00000428101 LY9Q9HBG7 655 aa31.61■■■□□ 2.65
LMO1-202ENST00000428101 DDX41Q9UJV9 622 aaKnown RBP31.61■■■□□ 2.65
LMO1-202ENST00000428101 MYH7BA7E2Y1 1941 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 TMEM265A0A087WTH1 108 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 GH1P01241 217 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 SUPT20HL2P0C7V6 817 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 CYP2C9P11712 490 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 HOXA13P31271 388 aaPredicted RBP31.6■■■□□ 2.65
LMO1-202ENST00000428101 COL9A3Q14050 684 aaPredicted RBP31.6■■■□□ 2.65
LMO1-202ENST00000428101 NFRKBQ6P4R8 1299 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 HERVK_113Q902F9 699 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 PDCD2LQ9BRP1 358 aa31.6■■■□□ 2.65
LMO1-202ENST00000428101 PNMA6FA0A0J9YX94 578 aa31.59■■■□□ 2.65
LMO1-202ENST00000428101 DNAJB2P25686 324 aa31.59■■■□□ 2.65
LMO1-202ENST00000428101 VWCEQ96DN2 955 aa31.59■■■□□ 2.65
LMO1-202ENST00000428101 UNC80Q8N2C7 3258 aa31.59■■■□□ 2.65
LMO1-202ENST00000428101 GRXCR1A8MXD5 290 aa31.58■■■□□ 2.65
LMO1-202ENST00000428101 MMP3P08254 477 aa31.58■■■□□ 2.65
LMO1-202ENST00000428101 FAM47CQ5HY64 1035 aa31.58■■■□□ 2.65
LMO1-202ENST00000428101 CXXC1Q9P0U4 656 aaPredicted RBP31.58■■■□□ 2.65
LMO1-202ENST00000428101 SLC27A2O14975 620 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms