RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CMTR1Q8N1G2 835 aaKnown RBP22.24■■□□□ 1.15
COL9A2-204ENST00000427563 PIBF1Q8WXW3 757 aa22.24■■□□□ 1.15
COL9A2-204ENST00000427563 GLT1D1Q96MS3 346 aa22.24■■□□□ 1.15
COL9A2-204ENST00000427563 NEK1Q96PY6 1258 aa22.24■■□□□ 1.15
COL9A2-204ENST00000427563 RMDN3Q96TC7 470 aa22.24■■□□□ 1.15
COL9A2-204ENST00000427563 SPZ1Q9BXG8 430 aa22.24■■□□□ 1.15
COL9A2-204ENST00000427563 UBE2OQ9C0C9 1292 aaKnown RBP22.24■■□□□ 1.15
COL9A2-204ENST00000427563 CLTBP09497 229 aa22.23■■□□□ 1.15
COL9A2-204ENST00000427563 EIF2AK2P19525 551 aaKnown RBP22.23■■□□□ 1.15
COL9A2-204ENST00000427563 HOXA13P31271 388 aaPredicted RBP22.23■■□□□ 1.15
COL9A2-204ENST00000427563 CCDC62Q6P9F0 684 aa22.23■■□□□ 1.15
COL9A2-204ENST00000427563 SGMS1Q86VZ5 419 aa22.23■■□□□ 1.15
COL9A2-204ENST00000427563 SLC43A3Q8NBI5 491 aa22.23■■□□□ 1.15
COL9A2-204ENST00000427563 NSUN6Q8TEA1 469 aaKnown RBP22.23■■□□□ 1.15
COL9A2-204ENST00000427563 AP5M1Q9H0R1 490 aa22.23■■□□□ 1.15
COL9A2-204ENST00000427563 PXMP2Q9NR77 195 aa22.23■■□□□ 1.15
COL9A2-204ENST00000427563 ARVCFO00192 962 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 KIAA0355O15063 1070 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 RNF20Q5VTR2 975 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 NFXL1Q6ZNB6 911 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 TDHQ8IZJ6 230 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 TMTC2Q8N394 836 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 BADQ92934 168 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 LRCH3Q96II8 777 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 TOX2Q96NM4 488 aa22.22■■□□□ 1.15
COL9A2-204ENST00000427563 SCN10AQ9Y5Y9 1956 aa22.21■■□□□ 1.15
COL9A2-204ENST00000427563 A0A0U1RQG5 324 aaPredicted RBP22.21■■□□□ 1.15
COL9A2-204ENST00000427563 CCDC69A6NI79 296 aa22.21■■□□□ 1.15
COL9A2-204ENST00000427563 FAM126BQ8IXS8 530 aa22.21■■□□□ 1.15
COL9A2-204ENST00000427563 IL31RAQ8NI17 732 aa22.21■■□□□ 1.15
COL9A2-204ENST00000427563 CTCFLQ8NI51 663 aaPredicted RBP22.21■■□□□ 1.15
COL9A2-204ENST00000427563 SCFD2Q8WU76 684 aa22.21■■□□□ 1.15
COL9A2-204ENST00000427563 BRPF3Q9ULD4 1205 aa22.21■■□□□ 1.15
COL9A2-204ENST00000427563 LAMA2P24043 3122 aaKnown RBP22.2■■□□□ 1.14
COL9A2-204ENST00000427563 MYH7BA7E2Y1 1941 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 CPA1P15085 419 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 SMARCA1P28370 1054 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 PSMC6P62333 389 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 PPP2R5BQ15173 497 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 ARHGEF16Q5VV41 709 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 DHX32Q7L7V1 743 aaKnown RBP22.2■■□□□ 1.14
COL9A2-204ENST00000427563 OR6J1Q8NGC5 347 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 IWS1Q96ST2 819 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 PDCD2LQ9BRP1 358 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 PPP4R2Q9NY27 417 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 PRKAG2Q9UGJ0 569 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 TBX21Q9UL17 535 aa22.2■■□□□ 1.14
COL9A2-204ENST00000427563 RGS20O76081 388 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 NR3C2P08235 984 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 TXNP10599 105 aaKnown RBP22.19■■□□□ 1.14
COL9A2-204ENST00000427563 KIF5BP33176 963 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 HSPA4P34932 840 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 TMTC3Q6ZXV5 915 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 VTI1AQ96AJ9 217 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 MPHOSPH6Q99547 160 aaKnown RBP22.19■■□□□ 1.14
COL9A2-204ENST00000427563 LBHD1Q9BQE6 289 aaPredicted RBP22.19■■□□□ 1.14
COL9A2-204ENST00000427563 MAP3K20Q9NYL2 800 aaKnown RBP22.19■■□□□ 1.14
COL9A2-204ENST00000427563 SNX14Q9Y5W7 946 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 SLC12A7Q9Y666 1083 aa22.19■■□□□ 1.14
COL9A2-204ENST00000427563 hCG_1642624A0A1W2PR95 340 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 CD4P01730 458 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 EPHB4P54760 987 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 PURAQ00577 322 aaKnown RBP22.18■■□□□ 1.14
COL9A2-204ENST00000427563 ITGA7Q13683 1181 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 STXBP2Q15833 593 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 LY6KQ17RY6 165 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 APOA5Q6Q788 366 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 SEPT14Q6ZU15 432 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 MICU3Q86XE3 530 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 SAMD3Q8N6K7 520 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 FANCBQ8NB91 859 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 TMEM39AQ9NV64 488 aa22.18■■□□□ 1.14
COL9A2-204ENST00000427563 FRMPD4Q14CM0 1322 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 DCDC2CA8MYV0 355 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 B4DLN1 442 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 NKRFO15226 690 aaKnown RBP eCLIP22.17■■□□□ 1.14
COL9A2-204ENST00000427563 CABYRO75952 493 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 MRPL12P52815 198 aaKnown RBP22.17■■□□□ 1.14
COL9A2-204ENST00000427563 ARHGAP1Q07960 439 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 TTLL4Q14679 1199 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 PGM5Q15124 567 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 LRIT3Q3SXY7 679 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 C9orf50Q5SZB4 431 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 RRP36Q96EU6 259 aaKnown RBP22.17■■□□□ 1.14
COL9A2-204ENST00000427563 ZFP91Q96JP5 570 aaPredicted RBP22.17■■□□□ 1.14
COL9A2-204ENST00000427563 LZTS2Q9BRK4 669 aa22.17■■□□□ 1.14
COL9A2-204ENST00000427563 A6NJR5 290 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 GCOM1H8Y6P7 765 aaPredicted RBP22.16■■□□□ 1.14
COL9A2-204ENST00000427563 ZEB2O60315 1214 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 POLR2MP0CAP2 368 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 CALM1P0DP23 149 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 CALM2P0DP24 149 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 CALM3P0DP25 149 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 GNAQP50148 359 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 FUT2Q10981 343 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 FCHSD1Q86WN1 690 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 PPP1R13LQ8WUF5 828 aa22.16■■□□□ 1.14
COL9A2-204ENST00000427563 FAM217BQ9NTX9 383 aaPredicted RBP22.16■■□□□ 1.14
COL9A2-204ENST00000427563 MROH7Q68CQ1 1323 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 CNTNAP5Q8WYK1 1306 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms