RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ORC4O43929 436 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 SUN1O94901 812 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 NDUFA10O95299 355 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZFYP08048 801 aaPredicted RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 CLTAP09496 248 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 HARSP12081 509 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 ATP5DP30049 168 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 PDE6CP51160 858 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 CLCN2P51788 898 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 ADKP55263 362 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 CEBPZQ03701 1054 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 ST3GAL1Q11201 340 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 ITGB3BPQ13352 177 aaPredicted RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 SPIDRQ14159 915 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPP2R5EQ16537 467 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 Q4G0T1 1027 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 THEMIS2Q5TEJ8 643 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 FAM173BQ6P4H8 233 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 KLC3Q6P597 504 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 DHX32Q7L7V1 743 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 TAOK1Q7L7X3 1001 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 RAB11FIP4Q86YS3 637 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 NSUN7Q8NE18 718 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 KIFAP3Q92845 792 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 BHMTQ93088 406 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 RBM17Q96I25 401 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 RNPC3Q96LT9 517 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZMAT2Q96NC0 199 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLF1Q9BQI6 1058 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 FSD1Q9BTV5 496 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 PCDH18Q9HCL0 1135 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 EXOC1Q9NV70 894 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 MIS18AQ9NYP9 233 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 SUN2Q9UH99 717 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 HPSEQ9Y251 543 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 LRCH1Q9Y2L9 728 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 TMED5Q9Y3A6 229 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 FAM208AQ9UK61 1670 aaKnown RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 EDC4Q6P2E9 1401 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 POGZQ7Z3K3 1410 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 MED1Q15648 1581 aaPredicted RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 MAGEA13PA6NCF6 341 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ELL2O00472 640 aaPredicted RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPEF1O14829 653 aaPredicted RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 SART1O43290 800 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 DIAPH2O60879 1101 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 S1PR4O95977 384 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ADH1BP00325 375 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 CHGBP05060 677 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 PYGLP06737 847 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 PARP1P09874 1014 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 NQO1P15559 274 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 KRT9P35527 623 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 HSPA9P38646 679 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 CDK17Q00537 523 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCDC15Q0P6D6 951 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 AIMP1Q12904 312 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 STK3Q13188 491 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 POSTNQ15063 836 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 SAFBQ15424 915 aaKnown RBP eCLIP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 TMEM132AQ24JP5 1023 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 MUM1Q2TAK8 710 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ADCK5Q3MIX3 580 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 TMEM259Q4ZIN3 620 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 HSP90AA5PQ58FG0 334 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 TTMPQ5BVD1 217 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 SPDYAQ5MJ70 313 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 TTC39AQ5SRH9 613 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 RESP18Q5W5W9 173 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 NCAPH2Q6IBW4 605 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 Q6ZUG5 572 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 UNC13DQ70J99 1090 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 RSPH3Q86UC2 560 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ALDH16A1Q8IZ83 802 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 IQCKQ8N0W5 287 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 AGGF1Q8N302 714 aaeCLIP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 KRI1Q8N9T8 703 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 SMYD1Q8NB12 490 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ERMNQ8TAM6 284 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 GRAMD1AQ96CP6 724 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCDC43Q96MW1 224 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 CATSPER2Q96P56 530 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZIM3Q96PE6 472 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 GSDMAQ96QA5 445 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 CDC5LQ99459 802 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 POLR3CQ9BUI4 534 aaPredicted RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 NDST4Q9H3R1 872 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ESF1Q9H501 851 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPANQ9NQ55 473 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 TBCCD1Q9NVR7 557 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 THEGQ9P2T0 379 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 GUCA1BQ9UMX6 200 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 SNX12Q9UMY4 172 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZNF232Q9UNY5 417 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 C2CD2Q9Y426 696 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 LRRC42Q9Y546 428 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms