RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 RFC2P35250 354 aa10.25□□□□□ -0.77
VNN3-208ENST00000427187 KCNJ6P48051 423 aa10.25□□□□□ -0.77
VNN3-208ENST00000427187 WDR5P61964 334 aaKnown RBP10.25□□□□□ -0.77
VNN3-208ENST00000427187 PPP2R5BQ15173 497 aa10.25□□□□□ -0.77
VNN3-208ENST00000427187 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
VNN3-208ENST00000427187 PHOSPHO2Q8TCD6 241 aa10.25□□□□□ -0.77
VNN3-208ENST00000427187 GPATCH3Q96I76 525 aa10.25□□□□□ -0.77
VNN3-208ENST00000427187 FSD1Q9BTV5 496 aa10.25□□□□□ -0.77
VNN3-208ENST00000427187 ADD3Q9UEY8 706 aaKnown RBP10.25□□□□□ -0.77
VNN3-208ENST00000427187 RPS6P62753 249 aaKnown RBP10.24□□□□□ -0.77
VNN3-208ENST00000427187 PDE4DQ08499 809 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 GPNMBQ14956 572 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 PTGISQ16647 500 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 VPS53Q5VIR6 699 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 GDF6Q6KF10 455 aaPredicted RBP10.24□□□□□ -0.77
VNN3-208ENST00000427187 FAM117BQ6P1L5 589 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 NFRKBQ6P4R8 1299 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 RNF207Q6ZRF8 634 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
VNN3-208ENST00000427187 CLEC4DQ8WXI8 215 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 CTAGE1Q96RT6 745 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 ZBED2Q9BTP6 218 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 TOMM22Q9NS69 142 aa10.24□□□□□ -0.77
VNN3-208ENST00000427187 A6NJR5 290 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 GPR37L1O60883 481 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 BAIAP3O94812 1187 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 TXNP10599 105 aaKnown RBP10.23□□□□□ -0.77
VNN3-208ENST00000427187 BFSP2Q13515 415 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 BRDTQ58F21 947 aaPredicted RBP10.23□□□□□ -0.77
VNN3-208ENST00000427187 RRP12Q5JTH9 1297 aaKnown RBP10.23□□□□□ -0.77
VNN3-208ENST00000427187 ZMYM1Q5SVZ6 1142 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 CHST3Q7LGC8 479 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 ALYREFQ86V81 257 aaKnown RBP10.23□□□□□ -0.77
VNN3-208ENST00000427187 DCAF4Q8WV16 495 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 DHX38Q92620 1227 aaKnown RBP10.23□□□□□ -0.77
VNN3-208ENST00000427187 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 RAD50Q92878 1312 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 SIP14410 1827 aa10.23□□□□□ -0.77
VNN3-208ENST00000427187 PI4K2BG5E9Z4 385 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 NBNO60934 754 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 IL9P15248 144 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 KCNA5P22460 613 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 EDNRBP24530 442 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 LY6KQ17RY6 165 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 USH1GQ495M9 461 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 LRRC8DQ7L1W4 858 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 MIER1Q8N108 512 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 PI4K2BQ8TCG2 481 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 SCFD2Q8WU76 684 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 AFG1LQ8WV93 481 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 TMEM47Q9BQJ4 181 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 CPVLQ9H3G5 476 aa10.22□□□□□ -0.77
VNN3-208ENST00000427187 UBE2ZQ9H832 354 aaPredicted RBP10.22□□□□□ -0.77
VNN3-208ENST00000427187 LINC01553A4QN01 128 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 NKRFO15226 690 aaKnown RBP eCLIP10.21□□□□□ -0.77
VNN3-208ENST00000427187 MMP3P08254 477 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 GOLGA8HP0CJ92 632 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 SELPP16109 830 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 SSTR3P32745 418 aaPredicted RBP10.21□□□□□ -0.77
VNN3-208ENST00000427187 PTPN11Q06124 597 aaPredicted RBP10.21□□□□□ -0.77
VNN3-208ENST00000427187 PPP4R3BQ5MIZ7 849 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 BTNL9Q6UXG8 535 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 SEPT14Q6ZU15 432 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.21□□□□□ -0.77
VNN3-208ENST00000427187 AFAP1L1Q8TED9 768 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 TBC1D5Q92609 795 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 KAT2BQ92831 832 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 WNT8BQ93098 351 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 UIMC1Q96RL1 719 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 ALG1Q9BT22 464 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 DCTPP1Q9H773 170 aa10.21□□□□□ -0.77
VNN3-208ENST00000427187 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.77
VNN3-208ENST00000427187 WDFY4Q6ZS81 3184 aa10.21□□□□□ -0.78
VNN3-208ENST00000427187 MYO7AQ13402 2215 aa10.21□□□□□ -0.78
VNN3-208ENST00000427187 ORC4O43929 436 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 SORBS3O60504 671 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 KPNA6O60684 536 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 GJB5O95377 273 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 ZNF286BP0CG31 522 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 PDHBP11177 359 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
VNN3-208ENST00000427187 CKBP12277 381 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 NOVP48745 357 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 ZNF200P98182 395 aaPredicted RBP10.2□□□□□ -0.78
VNN3-208ENST00000427187 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
VNN3-208ENST00000427187 CNKSR3Q6P9H4 555 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
VNN3-208ENST00000427187 FAM178BQ8IXR5 827 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 GJD3Q8N144 294 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 CAGE1Q8TC20 777 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 TGS1Q96RS0 853 aaKnown RBP10.2□□□□□ -0.78
VNN3-208ENST00000427187 CRBNQ96SW2 442 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 C17orf80Q9BSJ5 609 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 CHMP4BQ9H444 224 aaKnown RBP10.2□□□□□ -0.78
VNN3-208ENST00000427187 HDAC6Q9UBN7 1215 aa10.2□□□□□ -0.78
VNN3-208ENST00000427187 KIAA1217Q5T5P2 1943 aa10.19□□□□□ -0.78
VNN3-208ENST00000427187 TTC41PQ6P2S7 1318 aa10.19□□□□□ -0.78
VNN3-208ENST00000427187 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms