RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SYCE1Q8N0S2 351 aa15.28■□□□□ 0.04
RPL28-202ENST00000426763 TUBB2AQ13885 445 aa15.28■□□□□ 0.04
RPL28-202ENST00000426763 ENAHQ8N8S7 591 aaPredicted RBP15.28■□□□□ 0.04
RPL28-202ENST00000426763 TUBB2BQ9BVA1 445 aa15.28■□□□□ 0.04
RPL28-202ENST00000426763 SLIT1O75093 1534 aa15.28■□□□□ 0.04
RPL28-202ENST00000426763 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
RPL28-202ENST00000426763 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
RPL28-202ENST00000426763 GJA10Q969M2 543 aa15.28■□□□□ 0.04
RPL28-202ENST00000426763 STK36Q9NRP7 1315 aa15.27■□□□□ 0.04
RPL28-202ENST00000426763 XPOTO43592 962 aaKnown RBP15.27■□□□□ 0.04
RPL28-202ENST00000426763 MB21D2Q8IYB1 491 aaPredicted RBP15.27■□□□□ 0.04
RPL28-202ENST00000426763 KMT5AQ9NQR1 393 aa15.27■□□□□ 0.04
RPL28-202ENST00000426763 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.04
RPL28-202ENST00000426763 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.04
RPL28-202ENST00000426763 PPP1R18Q6NYC8 613 aa15.27■□□□□ 0.04
RPL28-202ENST00000426763 RCOR1Q9UKL0 485 aa15.27■□□□□ 0.04
RPL28-202ENST00000426763 ORC4O43929 436 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 GRIN3BO60391 1043 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 STAMBPO95630 424 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 ERCC5P28715 1186 aaPredicted RBP15.27■□□□□ 0.03
RPL28-202ENST00000426763 CCDC127Q96BQ5 260 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 OPA1O60313 960 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 GRM4Q14833 912 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 PDIA6Q15084 440 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 PFKFB3Q16875 520 aaPredicted RBP15.27■□□□□ 0.03
RPL28-202ENST00000426763 TYW1BQ6NUM6 668 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 ACCSQ96QU6 501 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 RPS6KC1Q96S38 1066 aa15.27■□□□□ 0.03
RPL28-202ENST00000426763 TERF1P54274 439 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 MRPS9P82933 396 aaKnown RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 SPP2Q13103 211 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 ARL6IP4Q66PJ3 421 aaKnown RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 MICALL2Q8IY33 904 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 PROCA1Q8NCQ7 364 aaPredicted RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 IFT81Q8WYA0 676 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 MMS19Q96T76 1030 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 PCDHA5Q9Y5H7 936 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 SRPRBQ9Y5M8 271 aaKnown RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 MICALCLQ6ZW33 695 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 OR8K1Q8NGG5 319 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 AIFM3Q96NN9 605 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 FAM204AQ9H8W3 233 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 INCENPQ9NQS7 918 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 USTQ9Y2C2 406 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 INO80B-WBP1J3KQ70 363 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 ABCB11O95342 1321 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 SLFN14P0C7P3 912 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 PPP2R3AQ06190 1150 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 TOB2Q14106 344 aaPredicted RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 KIAA1524Q8TCG1 905 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 INO80BQ9C086 356 aaPredicted RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 DAGLAQ9Y4D2 1042 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 STK10O94804 968 aaKnown RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 DHTKD1Q96HY7 919 aaPredicted RBP15.26■□□□□ 0.03
RPL28-202ENST00000426763 FAM169AQ9Y6X4 670 aa15.26■□□□□ 0.03
RPL28-202ENST00000426763 CLCN1P35523 988 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 INTS5Q6P9B9 1019 aaKnown RBP15.25■□□□□ 0.03
RPL28-202ENST00000426763 NEDD1Q8NHV4 660 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 MED10Q9BTT4 135 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 LY9Q9HBG7 655 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 RESTQ13127 1097 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 SNRNP48Q6IEG0 339 aaKnown RBP15.25■□□□□ 0.03
RPL28-202ENST00000426763 PDXDC2PQ6P474 469 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 RAVER2Q9HCJ3 691 aaKnown RBP15.25■□□□□ 0.03
RPL28-202ENST00000426763 CNOT7Q9UIV1 285 aaKnown RBP15.25■□□□□ 0.03
RPL28-202ENST00000426763 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 PCDHB6Q9Y5E3 794 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 NMT2O60551 498 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 FDX1P10109 184 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 GPIHBP1Q8IV16 184 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 MEGF6O75095 1541 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 F5H6K3 240 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 KLRC3Q07444 240 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 CLUL1Q15846 466 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 TMEM206Q9H813 350 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 MYO1AQ9UBC5 1043 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 CD2APQ9Y5K6 639 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 E7EVH7 732 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 HOXA7P31268 230 aaPredicted RBP15.25■□□□□ 0.03
RPL28-202ENST00000426763 CEP128Q6ZU80 1094 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 CCDC25Q86WR0 208 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 IFIH1Q9BYX4 1025 aaKnown RBP15.25■□□□□ 0.03
RPL28-202ENST00000426763 RIC8AQ9NPQ8 531 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 ST7Q9NRC1 585 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 TSKSQ9UJT2 592 aa15.25■□□□□ 0.03
RPL28-202ENST00000426763 MEIS1O00470 390 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 RHOXF2BP0C7M4 288 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 FERP16591 822 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 STXBP2Q15833 593 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 MTERF2Q49AM1 385 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 C12orf60Q5U649 245 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 U2AF1L4Q8WU68 220 aaKnown RBP15.24■□□□□ 0.03
RPL28-202ENST00000426763 RHOXF2Q9BQY4 288 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 FANCLQ9NW38 375 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 TLR3O15455 904 aaKnown RBP15.24■□□□□ 0.03
RPL28-202ENST00000426763 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 RMDN3Q96TC7 470 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms