RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 IWS1Q96ST2 819 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 WDR11Q9BZH6 1224 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 PRDM5Q9NQX1 630 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 RBM27Q9P2N5 1060 aaKnown RBP16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 Q9Y3F1 56 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 GCOM1H8Y6P7 765 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 POLR2MP0CAP2 368 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 MAGEA10P43363 369 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 NKX3-2P78367 333 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 BEX3Q00994 111 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 GHRHRQ02643 423 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 APOA5Q6Q788 366 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 FANCBQ8NB91 859 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 KCNB2Q92953 911 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 GDF15Q99988 308 aa16.82■□□□□ 0.28
NCKIPSD-205ENST00000426678 ELP1O95163 1332 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 RBM47A0AV96 593 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 NKRFO15226 690 aaKnown RBP eCLIP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 CTAGE5O15320 804 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 PQBP1O60828 265 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 EIF2AK2P19525 551 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 HOXA13P31271 388 aaPredicted RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 TLE2Q04725 743 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 TTLL4Q14679 1199 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 STXBP2Q15833 593 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 TMTC3Q6ZXV5 915 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 SRBD1Q8N5C6 995 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 PRO3102Q9H379 93 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 PXMP2Q9NR77 195 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 RBM28Q9NW13 759 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 DNAH12Q6ZR08 3092 aa16.81■□□□□ 0.28
NCKIPSD-205ENST00000426678 MROH7Q68CQ1 1323 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 A0A1W2PPC1 479 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 ZBTB43O43298 467 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 CABYRO75952 493 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 TXNP10599 105 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 PTGS1P23219 599 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 PSMA5P28066 241 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 BRDTQ58F21 947 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 TMEM63BQ5T3F8 832 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 SEPT14Q6ZU15 432 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 CMTR1Q8N1G2 835 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 OR6J1Q8NGC5 347 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 PDLIM7Q9NR12 457 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 KIAA1217Q5T5P2 1943 aa16.8■□□□□ 0.28
NCKIPSD-205ENST00000426678 TRIOBPQ9H2D6 2365 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 KLF18A0A0U1RQI7 1052 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 GOLGA8AA7E2F4 631 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 GOLGA8BA8MQT2 603 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 DCDC2CA8MYV0 355 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 NR3C2P08235 984 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 CLTBP09497 229 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 BMP8BP34820 402 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 CPT1AP50416 773 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 MDM2Q00987 491 aaPredicted RBP16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 RTN1Q16799 776 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 CXCL17Q6UXB2 119 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 FCHSD1Q86WN1 690 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 CCDC82Q8N4S0 544 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 CUL5Q93034 780 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 BRPF3Q9ULD4 1205 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 LTBP2Q14767 1821 aa16.79■□□□□ 0.28
NCKIPSD-205ENST00000426678 EIF3JO75822 258 aaKnown RBP16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 MYCLP12524 364 aaPredicted RBP16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 CPA1P15085 419 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 Q6ZUG5 572 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 ANKRD33Q7Z3H0 272 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 SMARCC2Q8TAQ2 1214 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 TOX2Q96NM4 488 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 PDCD2LQ9BRP1 358 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 POLR3EQ9NVU0 708 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 PCDH10Q9P2E7 1040 aa16.78■□□□□ 0.28
NCKIPSD-205ENST00000426678 ARVCFO00192 962 aa16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 ARIH2O95376 493 aa16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 RPS6KB1P23443 525 aa16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 RCAN1P53805 252 aa16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 PGM5Q15124 567 aa16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 COPS5Q92905 334 aa16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 MRVI1Q9Y6F6 885 aa16.77■□□□□ 0.28
NCKIPSD-205ENST00000426678 CNTNAP5Q8WYK1 1306 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 TLR3O15455 904 aaKnown RBP16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 GH1P01241 217 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 MYL3P08590 195 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 CCND2P30279 289 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 HEATR3Q7Z4Q2 680 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 BRF1Q92994 677 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 TMEM39AQ9NV64 488 aa16.76■□□□□ 0.27
NCKIPSD-205ENST00000426678 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 RAG1P15918 1043 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms