RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 GHRHRQ02643 423 aa20.65■□□□□ 0.9
HDLBP-212ENST00000426343 PPIGQ13427 754 aaKnown RBP eCLIP20.65■□□□□ 0.92e-23■■□□□ 12.6
HDLBP-212ENST00000426343 STXBP2Q15833 593 aa20.65■□□□□ 0.9
HDLBP-212ENST00000426343 CHST3Q7LGC8 479 aa20.65■□□□□ 0.9
HDLBP-212ENST00000426343 CATIPQ7Z7H3 387 aa20.65■□□□□ 0.9
HDLBP-212ENST00000426343 MTA3Q9BTC8 594 aa20.65■□□□□ 0.9
HDLBP-212ENST00000426343 LSG1Q9H089 658 aaKnown RBP20.65■□□□□ 0.9
HDLBP-212ENST00000426343 PCDHA1Q9Y5I3 950 aa20.65■□□□□ 0.9
HDLBP-212ENST00000426343 A6NJR5 290 aa20.64■□□□□ 0.89
HDLBP-212ENST00000426343 PPP1R11O60927 126 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-212ENST00000426343 HSD17B4P51659 736 aa20.64■□□□□ 0.89
HDLBP-212ENST00000426343 ANTXR2P58335 489 aa20.64■□□□□ 0.89
HDLBP-212ENST00000426343 PURAQ00577 322 aaKnown RBP20.64■□□□□ 0.89
HDLBP-212ENST00000426343 SLC35G1Q2M3R5 365 aa20.64■□□□□ 0.89
HDLBP-212ENST00000426343 CCDC62Q6P9F0 684 aa20.64■□□□□ 0.89
HDLBP-212ENST00000426343 TMEM199Q8N511 208 aa20.64■□□□□ 0.89
HDLBP-212ENST00000426343 RNPC3Q96LT9 517 aaKnown RBP20.64■□□□□ 0.89
HDLBP-212ENST00000426343 ESYT1Q9BSJ8 1104 aa20.64■□□□□ 0.89
HDLBP-212ENST00000426343 MTG1Q9BT17 334 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-212ENST00000426343 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.89
HDLBP-212ENST00000426343 LCTP09848 1927 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 OPLAHO14841 1288 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 EIF3JO75822 258 aaKnown RBP20.63■□□□□ 0.89
HDLBP-212ENST00000426343 CFBP00751 764 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 MYL3P08590 195 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 PSMC6P62333 389 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 MAP3K14Q99558 947 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 STXBP5LQ9Y2K9 1186 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 LRRC37A2A6NM11 1700 aa20.63■□□□□ 0.89
HDLBP-212ENST00000426343 CYTH3O43739 400 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 CASC1Q6TDU7 716 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 SEPT14Q6ZU15 432 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 TMTC2Q8N394 836 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 COPS5Q92905 334 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 PIGSQ96S52 555 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 PPP1R12CQ9BZL4 782 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 TRPV6Q9H1D0 765 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 ALDH8A1Q9H2A2 487 aaPredicted RBP20.62■□□□□ 0.89
HDLBP-212ENST00000426343 PXMP2Q9NR77 195 aa20.62■□□□□ 0.89
HDLBP-212ENST00000426343 PNMA6FA0A0J9YX94 578 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 SLC27A2O14975 620 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 B4GALT4O60513 344 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 ARIH2O95376 493 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 NR3C2P08235 984 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 MCM5P33992 734 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 NECTIN1Q15223 517 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 ZNF697Q5TEC3 545 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 C16orf59Q7L2K0 433 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 HOMER1Q86YM7 354 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 HIPK3Q9H422 1215 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 LY9Q9HBG7 655 aa20.61■□□□□ 0.89
HDLBP-212ENST00000426343 SUPT20HL2P0C7V6 817 aa20.6■□□□□ 0.89
HDLBP-212ENST00000426343 CSF2RAP15509 400 aa20.6■□□□□ 0.89
HDLBP-212ENST00000426343 EIF2AK2P19525 551 aaKnown RBP20.6■□□□□ 0.89
HDLBP-212ENST00000426343 CYP2C18P33260 490 aa20.6■□□□□ 0.89
HDLBP-212ENST00000426343 TMEM240Q5SV17 173 aa20.6■□□□□ 0.89
HDLBP-212ENST00000426343 CREB3L3Q68CJ9 461 aa20.6■□□□□ 0.89
HDLBP-212ENST00000426343 TMEM87BQ96K49 555 aa20.6■□□□□ 0.89
HDLBP-212ENST00000426343 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.6■□□□□ 0.89
HDLBP-212ENST00000426343 LAMA2P24043 3122 aaKnown RBP20.59■□□□□ 0.89
HDLBP-212ENST00000426343 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.59■□□□□ 0.89
HDLBP-212ENST00000426343 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.59■□□□□ 0.89
HDLBP-212ENST00000426343 GCOM1H8Y6P7 765 aaPredicted RBP20.59■□□□□ 0.89
HDLBP-212ENST00000426343 PRC1O43663 620 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 DDAH1O94760 285 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 GH1P01241 217 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 POLR2MP0CAP2 368 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 SMARCA1P28370 1054 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 KIF5BP33176 963 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 LY6KQ17RY6 165 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 NFRKBQ6P4R8 1299 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 PSRC1Q6PGN9 363 aaPredicted RBP20.59■□□□□ 0.89
HDLBP-212ENST00000426343 ZNF654Q8IZM8 581 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 LZTS2Q9BRK4 669 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 NOC4LQ9BVI4 516 aaKnown RBP20.59■□□□□ 0.89
HDLBP-212ENST00000426343 IL23AQ9NPF7 189 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 ANO2Q9NQ90 1003 aa20.59■□□□□ 0.89
HDLBP-212ENST00000426343 DDX41Q9UJV9 622 aaKnown RBP20.59■□□□□ 0.89
HDLBP-212ENST00000426343 GNAQP50148 359 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 PTPN11Q06124 597 aaPredicted RBP20.58■□□□□ 0.89
HDLBP-212ENST00000426343 ARHGAP1Q07960 439 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 NBPF20Q3BBV1 942 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 VSIG10LQ86VR7 867 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 CTCFLQ8NI51 663 aaPredicted RBP20.58■□□□□ 0.89
HDLBP-212ENST00000426343 AFG1LQ8WV93 481 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 PDCD2LQ9BRP1 358 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 SPZ1Q9BXG8 430 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 SEMA6BQ9H3T3 888 aa20.58■□□□□ 0.89
HDLBP-212ENST00000426343 SH2B2O14492 632 aaPredicted RBP20.57■□□□□ 0.88
HDLBP-212ENST00000426343 HOXA13P31271 388 aaPredicted RBP20.57■□□□□ 0.88
HDLBP-212ENST00000426343 LIFRP42702 1097 aa20.57■□□□□ 0.88
HDLBP-212ENST00000426343 RASIP1Q5U651 963 aa20.57■□□□□ 0.88
HDLBP-212ENST00000426343 KCNV1Q6PIU1 500 aa20.57■□□□□ 0.88
HDLBP-212ENST00000426343 EMID1Q96A84 441 aaPredicted RBP20.57■□□□□ 0.88
HDLBP-212ENST00000426343 GUCD1Q96NT3 240 aa20.57■□□□□ 0.88
HDLBP-212ENST00000426343 TRMT13Q9NUP7 481 aaKnown RBP20.57■□□□□ 0.88
HDLBP-212ENST00000426343 MRVI1Q9Y6F6 885 aa20.57■□□□□ 0.88
HDLBP-212ENST00000426343 UMODL1Q5DID0 1318 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms