RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 USP26Q9BXU7 913 aa15.78■□□□□ 0.12
SNX3-204ENST00000426155 COLQQ9Y215 455 aaPredicted RBP15.78■□□□□ 0.12
SNX3-204ENST00000426155 ATP11BQ9Y2G3 1177 aa15.78■□□□□ 0.12
SNX3-204ENST00000426155 MYH7BA7E2Y1 1941 aa15.78■□□□□ 0.12
SNX3-204ENST00000426155 CNTNAP5Q8WYK1 1306 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 ZBTB43O43298 467 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 CASTP20810 708 aaKnown RBP15.77■□□□□ 0.12
SNX3-204ENST00000426155 RPS6KB1P23443 525 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 ACLYP53396 1101 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 GJA9P57773 515 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 GHRHRQ02643 423 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 TRIM60Q495X7 471 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 BRF1Q92994 677 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 RMDN3Q96TC7 470 aa15.77■□□□□ 0.12
SNX3-204ENST00000426155 NAP1L2Q9ULW6 460 aaPredicted RBP15.77■□□□□ 0.12
SNX3-204ENST00000426155 LOC102724159A0A0B4J2E5 919 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 GOLGA8AA7E2F4 631 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 GOLGA8BA8MQT2 603 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 ARIH2O95376 493 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 ASGR1P07306 291 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 HMGB1P09429 215 aaKnown RBP15.76■□□□□ 0.11
SNX3-204ENST00000426155 CST5P28325 142 aaPredicted RBP15.76■□□□□ 0.11
SNX3-204ENST00000426155 GNAQP50148 359 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 FGD1P98174 961 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 PWP2Q15269 919 aaKnown RBP15.76■□□□□ 0.11
SNX3-204ENST00000426155 RTN1Q16799 776 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 SYNE3Q6ZMZ3 975 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 IL31RAQ8NI17 732 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 COPS5Q92905 334 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
SNX3-204ENST00000426155 WDR11Q9BZH6 1224 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 SEC63Q9UGP8 760 aaKnown RBP15.76■□□□□ 0.11
SNX3-204ENST00000426155 TRIOBPQ9H2D6 2365 aa15.76■□□□□ 0.11
SNX3-204ENST00000426155 RBM47A0AV96 593 aaKnown RBP15.75■□□□□ 0.11
SNX3-204ENST00000426155 DYNC1LI2O43237 492 aaPredicted RBP15.75■□□□□ 0.11
SNX3-204ENST00000426155 CDC27P30260 824 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
SNX3-204ENST00000426155 SNX17Q15036 470 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 GNASQ5JWF2 1037 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 ARHGEF16Q5VV41 709 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 IQSEC1Q6DN90 963 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 FCHSD1Q86WN1 690 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 NSUN6Q8TEA1 469 aaKnown RBP15.75■□□□□ 0.11
SNX3-204ENST00000426155 GPKOWQ92917 476 aaPredicted RBP eCLIP15.75■□□□□ 0.11
SNX3-204ENST00000426155 LZTS2Q9BRK4 669 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 UPF3BQ9BZI7 483 aaKnown RBP15.75■□□□□ 0.11
SNX3-204ENST00000426155 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
SNX3-204ENST00000426155 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
SNX3-204ENST00000426155 SMARCA1P28370 1054 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 FUT2Q10981 343 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 PPP2R5BQ15173 497 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 FSCN1Q16658 493 aaKnown RBP15.74■□□□□ 0.11
SNX3-204ENST00000426155 DUSP28Q4G0W2 176 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 SEPT14Q6ZU15 432 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 MPHOSPH6Q99547 160 aaKnown RBP15.74■□□□□ 0.11
SNX3-204ENST00000426155 PDCD2LQ9BRP1 358 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 TSEN34Q9BSV6 310 aaKnown RBP15.74■□□□□ 0.11
SNX3-204ENST00000426155 AP5M1Q9H0R1 490 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 STARD7Q9NQZ5 370 aa15.74■□□□□ 0.11
SNX3-204ENST00000426155 MOXD2PA6NHM9 499 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 GCOM1H8Y6P7 765 aaPredicted RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 NR3C2P08235 984 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 POLR2MP0CAP2 368 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 TXNP10599 105 aaKnown RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 MYCLP12524 364 aaPredicted RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 ADD1P35611 737 aaKnown RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 METAP2P50579 478 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNX3-204ENST00000426155 PGM5Q15124 567 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 USP17L6PQ6QN14 398 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 CXCL17Q6UXB2 119 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 HEATR3Q7Z4Q2 680 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 SH3RF1Q7Z6J0 888 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 OR6J1Q8NGC5 347 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 SCFD2Q8WU76 684 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 LARP6Q9BRS8 491 aaKnown RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 MAF1Q9H063 256 aa15.73■□□□□ 0.11
SNX3-204ENST00000426155 PRDM5Q9NQX1 630 aaPredicted RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 RBM28Q9NW13 759 aaKnown RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 RBM27Q9P2N5 1060 aaKnown RBP15.73■□□□□ 0.11
SNX3-204ENST00000426155 B4DLN1 442 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 EPB41L2O43491 1005 aaKnown RBP15.72■□□□□ 0.11
SNX3-204ENST00000426155 PQBP1O60828 265 aaKnown RBP15.72■□□□□ 0.11
SNX3-204ENST00000426155 PPFIA3O75145 1194 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 SEC24BO95487 1268 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 PSMA5P28066 241 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 MAGEA10P43363 369 aaPredicted RBP15.72■□□□□ 0.11
SNX3-204ENST00000426155 MRPL12P52815 198 aaKnown RBP15.72■□□□□ 0.11
SNX3-204ENST00000426155 NKX3-2P78367 333 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 TLE2Q04725 743 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 TRAF1Q13077 416 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 TOB2Q14106 344 aaPredicted RBP15.72■□□□□ 0.11
SNX3-204ENST00000426155 STXBP2Q15833 593 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 UBE2SQ16763 222 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 LY6KQ17RY6 165 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 TYW1BQ6NUM6 668 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 RUFY3Q7L099 469 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 PCSK9Q8NBP7 692 aaKnown RBP15.72■□□□□ 0.11
SNX3-204ENST00000426155 GLT1D1Q96MS3 346 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms