RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 GPR101Q96P66 508 aaPredicted RBP8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 C7orf25Q9BPX7 421 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 SEC63Q9UGP8 760 aaKnown RBP8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 FAM184BQ9ULE4 1060 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 DUOX1Q9NRD9 1551 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 DISP2A7MBM2 1401 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 LRRC53A6NM62 1247 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 LAD1O00515 517 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 ARID5AQ03989 594 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 GFPT1Q06210 699 aaPredicted RBP8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 GRIK5Q16478 980 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 SPTY2D1Q68D10 685 aaPredicted RBP8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 GALNT17Q6IS24 598 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 PLCD3Q8N3E9 789 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 AK8Q96MA6 479 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 ALS2CR12Q96Q35 445 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 ERGIC2Q96RQ1 377 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 PIGSQ96S52 555 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 OSBPL9Q96SU4 736 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 RUFY1Q96T51 708 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 CUEDC2Q9H467 287 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 PLAGL2Q9UPG8 496 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 FLT1P17948 1338 aa8.36□□□□□ -1.07
SMARCC1-202ENST00000425518 MYMKA6NI61 221 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 MARCH6O60337 910 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 GNA11P29992 359 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 PRPHP41219 470 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 CCT5P48643 541 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 FNBP4Q8N3X1 1017 aaPredicted RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 MS4A14Q96JA4 679 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 ANKRD2Q9GZV1 360 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 SH2D4AQ9H788 454 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 POLD4Q9HCU8 107 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 ZC3H4Q9UPT8 1303 aaKnown RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 PALM3A6NDB9 673 aaPredicted RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 BAG3O95817 575 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 CLEC4GQ6UXB4 293 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 ZNF662Q6ZS27 426 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 IFT81Q8WYA0 676 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 MMTAG2Q9BU76 263 aaKnown RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 KANSL2Q9H9L4 492 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 COL4A1P02462 1669 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 MAGEA9P43362 315 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 IRAK1P51617 712 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 PPARDQ03181 441 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 KCTD16Q68DU8 428 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 TMED8Q6PL24 325 aaPredicted RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 GLIS3Q8NEA6 775 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 PURBQ96QR8 312 aaKnown RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 EYA3Q99504 573 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 ZMYND12Q9H0C1 365 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 TBC1D7Q9P0N9 293 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 SALL4Q9UJQ4 1053 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 HYOU1Q9Y4L1 999 aa8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 CICQ96RK0 1608 aaPredicted RBP8.35□□□□□ -1.07
SMARCC1-202ENST00000425518 POTEMA6NI47 508 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 CALCRLQ16602 461 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 TTC31Q49AM3 519 aaPredicted RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 CENPPQ6IPU0 288 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 REXO1Q8N1G1 1221 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 MMGT1Q8N4V1 131 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 DAGLBQ8NCG7 672 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 AENQ8WTP8 325 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 COA7Q96BR5 231 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 MAGEF1Q9HAY2 307 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 LTBP4Q8N2S1 1624 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 SHANK3Q9BYB0 1731 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 LRP5O75197 1615 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 A0A1W2PQJ5 194 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 ESYT3A0FGR9 886 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 RASA1P20936 1047 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 GNGT1P63211 74 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 GRB10Q13322 594 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 MAN2A1Q16706 1144 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 C8orf74Q6P047 294 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 MICALL1Q8N3F8 863 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 BCAS4Q8TDM0 211 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 LARP4BQ92615 738 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 GJA10Q969M2 543 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 CAPS2Q9BXY5 557 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 SIK3Q9Y2K2 1263 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 FRMPD2Q68DX3 1309 aaPredicted RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 TRAF5O00463 557 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 TDP2O95551 362 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 SLC1A4P43007 532 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 EIF6P56537 245 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 CORO7P57737 925 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 CDK17Q00537 523 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 CCDC40Q4G0X9 1142 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 FIGNQ5HY92 759 aa8.34□□□□□ -1.07
SMARCC1-202ENST00000425518 TSEN2Q8NCE0 465 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms