RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 TCP10L2B9ZVM9 353 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 PLSCR1O15162 318 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 TRIM10Q9UDY6 481 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 GH2P01242 217 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 AMPD3Q01432 767 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 TBC1D8BQ0IIM8 1120 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 SYCP1Q15431 976 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 ZNF397Q8NF99 534 aaPredicted RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 ZHX3Q9H4I2 956 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 POLD4Q9HCU8 107 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 PI4KBQ9UBF8 816 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 LGALS16A8MUM7 142 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 PPIP5K2O43314 1243 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 TRIM21P19474 475 aaKnown RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 STRIP1Q5VSL9 837 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 SIAH1Q8IUQ4 282 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 HAS1Q92839 578 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 C7orf25Q9BPX7 421 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 SEMA6BQ9H3T3 888 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 AGPAT5Q9NUQ2 364 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
UBR4-207ENST00000425413 PCDHA12Q9UN75 941 aa12.93□□□□□ -0.34
UBR4-207ENST00000425413 NPHP3-ACAD11A0A0J9YXS1 232 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 F5H6K3 240 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 RAD17O75943 681 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 CCNE1P24864 410 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 HOXA13P31271 388 aaPredicted RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 KLRC3Q07444 240 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 ZYXQ15942 572 aaKnown RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 SLC30A10Q6XR72 485 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 DDX12PQ92771 950 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 NOC4LQ9BVI4 516 aaKnown RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 CUEDC2Q9H467 287 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 LUC7L2Q9Y383 392 aaKnown RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 GOLGA6L9A6NEM1 432 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 E9PMD0 336 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 KIF5CO60282 957 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 ABCB5Q2M3G0 1257 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 KIFC2Q96AC6 838 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 DHTKD1Q96HY7 919 aaPredicted RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
UBR4-207ENST00000425413 CSRNP1Q96S65 589 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 KANSL2Q9H9L4 492 aa12.92□□□□□ -0.34
UBR4-207ENST00000425413 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 CCDC17Q96LX7 622 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 THAP9Q9H5L6 903 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 GUCA1BQ9UMX6 200 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 POTECB2RU33 542 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 hCG_1984214I3L0E3 225 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
UBR4-207ENST00000425413 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.348e-9■■■■□ 22.2
UBR4-207ENST00000425413 PRR16Q569H4 304 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 CNNM4Q6P4Q7 775 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 CYP26C1Q6V0L0 522 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 SLC35F6Q8N357 371 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 ZNF713Q8N859 430 aaPredicted RBP12.91□□□□□ -0.34
UBR4-207ENST00000425413 RAD54LQ92698 747 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
UBR4-207ENST00000425413 NAA15Q9BXJ9 866 aaKnown RBP12.91□□□□□ -0.34
UBR4-207ENST00000425413 KIAA1024Q9UPX6 916 aa12.91□□□□□ -0.34
UBR4-207ENST00000425413 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
UBR4-207ENST00000425413 MEIS1O00470 390 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 NDUFB10O96000 172 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 MYL1P05976 194 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 EZH2Q15910 746 aaKnown RBP12.9□□□□□ -0.34
UBR4-207ENST00000425413 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
UBR4-207ENST00000425413 AEBP2Q6ZN18 517 aaPredicted RBP12.9□□□□□ -0.34
UBR4-207ENST00000425413 NELFCDQ8IXH7 590 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 FLAD1Q8NFF5 587 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 FEZ1Q99689 392 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
UBR4-207ENST00000425413 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
UBR4-207ENST00000425413 OGFRQ9NZT2 677 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 LTBP1Q14766 1721 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 TADA3O75528 432 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 TUBB4AP04350 444 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 OR8K1Q8NGG5 319 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 FGFBP2Q9BYJ0 223 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 ANO3Q9BYT9 981 aa12.9□□□□□ -0.34
UBR4-207ENST00000425413 BICDL2A1A5D9 508 aa12.9□□□□□ -0.35
UBR4-207ENST00000425413 SEC31AO94979 1220 aaKnown RBP12.9□□□□□ -0.35
UBR4-207ENST00000425413 ECE1P42892 770 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms