RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 RMDN3Q96TC7 470 aa25.03■■□□□ 1.6
CDCP1-202ENST00000425231 PCDHA1Q9Y5I3 950 aa25.03■■□□□ 1.6
CDCP1-202ENST00000425231 NKRFO15226 690 aaKnown RBP eCLIP25.02■■□□□ 1.6
CDCP1-202ENST00000425231 PRC1O43663 620 aa25.02■■□□□ 1.6
CDCP1-202ENST00000425231 CFBP00751 764 aa25.02■■□□□ 1.6
CDCP1-202ENST00000425231 CD4P01730 458 aa25.02■■□□□ 1.6
CDCP1-202ENST00000425231 ITGA7Q13683 1181 aa25.02■■□□□ 1.6
CDCP1-202ENST00000425231 HOMER1Q86YM7 354 aa25.02■■□□□ 1.6
CDCP1-202ENST00000425231 IWS1Q96ST2 819 aa25.02■■□□□ 1.6
CDCP1-202ENST00000425231 ARIH2O95376 493 aa25.01■■□□□ 1.59
CDCP1-202ENST00000425231 TIMP1P01033 207 aa25.01■■□□□ 1.59
CDCP1-202ENST00000425231 MCM5P33992 734 aa25.01■■□□□ 1.59
CDCP1-202ENST00000425231 EPHB4P54760 987 aa25.01■■□□□ 1.59
CDCP1-202ENST00000425231 PPP2R5BQ15173 497 aa25.01■■□□□ 1.59
CDCP1-202ENST00000425231 COPS5Q92905 334 aa25.01■■□□□ 1.59
CDCP1-202ENST00000425231 MAP3K14Q99558 947 aa25.01■■□□□ 1.59
CDCP1-202ENST00000425231 MAP3K20Q9NYL2 800 aaKnown RBP25.01■■□□□ 1.59
CDCP1-202ENST00000425231 TXNP10599 105 aaKnown RBP25■■□□□ 1.59
CDCP1-202ENST00000425231 PSMC6P62333 389 aa25■■□□□ 1.59
CDCP1-202ENST00000425231 CCDC62Q6P9F0 684 aa25■■□□□ 1.59
CDCP1-202ENST00000425231 CASC1Q6TDU7 716 aa25■■□□□ 1.59
CDCP1-202ENST00000425231 ZNF654Q8IZM8 581 aa25■■□□□ 1.59
CDCP1-202ENST00000425231 OR6J1Q8NGC5 347 aa25■■□□□ 1.59
CDCP1-202ENST00000425231 PNMA6FA0A0J9YX94 578 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 SH2B2O14492 632 aaPredicted RBP24.99■■□□□ 1.59
CDCP1-202ENST00000425231 CPT1AP50416 773 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 PURAQ00577 322 aaKnown RBP24.99■■□□□ 1.59
CDCP1-202ENST00000425231 STXBP2Q15833 593 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 ARHGEF16Q5VV41 709 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 SAMD3Q8N6K7 520 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 TMEM87BQ96K49 555 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 MYL10Q9BUA6 226 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 SEZ6LQ9BYH1 1024 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 PXMP2Q9NR77 195 aa24.99■■□□□ 1.59
CDCP1-202ENST00000425231 TLR3O15455 904 aaKnown RBP24.98■■□□□ 1.59
CDCP1-202ENST00000425231 DDAH1O94760 285 aa24.98■■□□□ 1.59
CDCP1-202ENST00000425231 FPGSQ05932 587 aa24.98■■□□□ 1.59
CDCP1-202ENST00000425231 TTLL4Q14679 1199 aa24.98■■□□□ 1.59
CDCP1-202ENST00000425231 TMTC2Q8N394 836 aa24.98■■□□□ 1.59
CDCP1-202ENST00000425231 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
CDCP1-202ENST00000425231 POLR3EQ9NVU0 708 aa24.98■■□□□ 1.59
CDCP1-202ENST00000425231 KIAA1217Q5T5P2 1943 aa24.98■■□□□ 1.59
CDCP1-202ENST00000425231 A6NJR5 290 aa24.97■■□□□ 1.59
CDCP1-202ENST00000425231 NR3C2P08235 984 aa24.97■■□□□ 1.59
CDCP1-202ENST00000425231 EIF2AK2P19525 551 aaKnown RBP24.97■■□□□ 1.59
CDCP1-202ENST00000425231 TRAF1Q13077 416 aa24.97■■□□□ 1.59
CDCP1-202ENST00000425231 MFSD5Q6N075 450 aa24.97■■□□□ 1.59
CDCP1-202ENST00000425231 SEPT14Q6ZU15 432 aa24.97■■□□□ 1.59
CDCP1-202ENST00000425231 HOXA13P31271 388 aaPredicted RBP24.96■■□□□ 1.59
CDCP1-202ENST00000425231 LIFRP42702 1097 aa24.96■■□□□ 1.59
CDCP1-202ENST00000425231 Q7L0L9 218 aa24.96■■□□□ 1.59
CDCP1-202ENST00000425231 DEFB123Q8N688 67 aa24.96■■□□□ 1.59
CDCP1-202ENST00000425231 CTCFLQ8NI51 663 aaPredicted RBP24.96■■□□□ 1.59
CDCP1-202ENST00000425231 CDC45O75419 566 aa24.95■■□□□ 1.59
CDCP1-202ENST00000425231 EIF3JO75822 258 aaKnown RBP24.95■■□□□ 1.59
CDCP1-202ENST00000425231 MYL3P08590 195 aa24.95■■□□□ 1.59
CDCP1-202ENST00000425231 SMARCA1P28370 1054 aa24.95■■□□□ 1.59
CDCP1-202ENST00000425231 KIF5BP33176 963 aa24.95■■□□□ 1.59
CDCP1-202ENST00000425231 LY6KQ17RY6 165 aa24.95■■□□□ 1.59
CDCP1-202ENST00000425231 PDCD2LQ9BRP1 358 aa24.95■■□□□ 1.59
CDCP1-202ENST00000425231 SPZ1Q9BXG8 430 aa24.95■■□□□ 1.59
CDCP1-202ENST00000425231 CCDC69A6NI79 296 aa24.95■■□□□ 1.58
CDCP1-202ENST00000425231 B4GALT4O60513 344 aa24.95■■□□□ 1.58
CDCP1-202ENST00000425231 BRDTQ58F21 947 aaPredicted RBP24.95■■□□□ 1.58
CDCP1-202ENST00000425231 RNF20Q5VTR2 975 aa24.95■■□□□ 1.58
CDCP1-202ENST00000425231 NFXL1Q6ZNB6 911 aa24.95■■□□□ 1.58
CDCP1-202ENST00000425231 MTG1Q9BT17 334 aaPredicted RBP24.95■■□□□ 1.58
CDCP1-202ENST00000425231 TRPV6Q9H1D0 765 aa24.95■■□□□ 1.58
CDCP1-202ENST00000425231 COL6A3P12111 3177 aa24.94■■□□□ 1.58
CDCP1-202ENST00000425231 PIBF1Q8WXW3 757 aa24.94■■□□□ 1.58
CDCP1-202ENST00000425231 LRRC2Q9BYS8 371 aa24.94■■□□□ 1.58
CDCP1-202ENST00000425231 PPP1R12CQ9BZL4 782 aa24.94■■□□□ 1.58
CDCP1-202ENST00000425231 ALDH8A1Q9H2A2 487 aaPredicted RBP24.94■■□□□ 1.58
CDCP1-202ENST00000425231 DDX41Q9UJV9 622 aaKnown RBP24.94■■□□□ 1.58
CDCP1-202ENST00000425231 SCN10AQ9Y5Y9 1956 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 GCOM1H8Y6P7 765 aaPredicted RBP24.93■■□□□ 1.58
CDCP1-202ENST00000425231 KPNA6O60684 536 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 POLR2MP0CAP2 368 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 RXRAP19793 462 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 ARHGAP1Q07960 439 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 TSGA10IPQ3SY00 556 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 C16orf59Q7L2K0 433 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 VSIG10LQ86VR7 867 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 SRBD1Q8N5C6 995 aaKnown RBP24.93■■□□□ 1.58
CDCP1-202ENST00000425231 LZTS2Q9BRK4 669 aa24.93■■□□□ 1.58
CDCP1-202ENST00000425231 RGS20O76081 388 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 PLEKHA8P1O95397 391 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 GH1P01241 217 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 CSF2RAP15509 400 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 CYP2C18P33260 490 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 PGM5Q15124 567 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 FAM109BQ6ICB4 259 aaPredicted RBP24.92■■□□□ 1.58
CDCP1-202ENST00000425231 SGMS1Q86VZ5 419 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 RASEFQ8IZ41 740 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 AFG1LQ8WV93 481 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 RRP36Q96EU6 259 aaKnown RBP24.92■■□□□ 1.58
CDCP1-202ENST00000425231 NEK1Q96PY6 1258 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 MTMR10Q9NXD2 777 aa24.92■■□□□ 1.58
CDCP1-202ENST00000425231 CALM1P0DP23 149 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 CALM2P0DP24 149 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms