RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RBBP6Q7Z6E9 1792 aaKnown RBP15.32■□□□□ 0.04
PRPF39-202ENST00000424478 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 MORF4L1Q9UBU8 362 aa15.32■□□□□ 0.04
PRPF39-202ENST00000424478 PLXNB2O15031 1838 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 SOWAHBA6NEL2 793 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 FAM86B1E9PN63 330 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
PRPF39-202ENST00000424478 FAM86B2P0C5J1 330 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 ADORA2AP29274 412 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 GALNT17Q6IS24 598 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 MCF2L2Q86YR7 1114 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 CLIC6Q96NY7 704 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 MKI67P46013 3256 aaKnown RBP15.31■□□□□ 0.04
PRPF39-202ENST00000424478 PIK3CDO00329 1044 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 COBLO75128 1261 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 KCTD2Q14681 263 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 ARHGEF16Q5VV41 709 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 ANO1Q5XXA6 986 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 NEK8Q86SG6 692 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
PRPF39-202ENST00000424478 FCER1AP12319 257 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 PRR16Q569H4 304 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 POTEB2H3BUK9 544 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 KRT85P78386 507 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 LEO1Q8WVC0 666 aaPredicted RBP15.3■□□□□ 0.04
PRPF39-202ENST00000424478 SPATA32Q96LK8 384 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 PXMP2Q9NR77 195 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 MRPS9P82933 396 aaKnown RBP15.3■□□□□ 0.04
PRPF39-202ENST00000424478 PTGDRQ13258 359 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 STK38Q15208 465 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 FGD4Q96M96 766 aa15.3■□□□□ 0.04
PRPF39-202ENST00000424478 SLC25A27O95847 323 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 CDC25AP30304 524 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 CCNA1P78396 465 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 BCAS3Q9H6U6 928 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 IVNS1ABPQ9Y6Y0 642 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 ZNF76P36508 570 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 TRAF1Q13077 416 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 PGM5Q15124 567 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 RILPL1Q5EBL4 403 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 TMEM63BQ5T3F8 832 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 PDCD2LQ9BRP1 358 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
PRPF39-202ENST00000424478 NOL7Q9UMY1 257 aaKnown RBP15.29■□□□□ 0.04
PRPF39-202ENST00000424478 MAP2K2P36507 400 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 SREBF1P36956 1147 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 PTPAQ15257 358 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 MROH8Q9H579 483 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 ATP6V1DQ9Y5K8 247 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 CYP2B6P20813 491 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 CCL14Q16627 93 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 LINC00301Q8NCQ3 95 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 TRIM47Q96LD4 638 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 ZNF396Q96N95 335 aaPredicted RBP15.28■□□□□ 0.04
PRPF39-202ENST00000424478 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.28■□□□□ 0.04
PRPF39-202ENST00000424478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.28■□□□□ 0.04
PRPF39-202ENST00000424478 TNPO2O14787 897 aaKnown RBP15.28■□□□□ 0.04
PRPF39-202ENST00000424478 ITGB5P18084 799 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 PSMC4P43686 418 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 ME1P48163 572 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 NFKBIBQ15653 356 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 IL17AQ16552 155 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 TKFCQ3LXA3 575 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 NPLOC4Q8TAT6 608 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 FBXO40Q9UH90 709 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 DDX25Q9UHL0 483 aaKnown RBP15.28■□□□□ 0.04
PRPF39-202ENST00000424478 GABRQQ9UN88 632 aa15.28■□□□□ 0.04
PRPF39-202ENST00000424478 DOCK5Q9H7D0 1870 aa15.27■□□□□ 0.04
PRPF39-202ENST00000424478 ARP10275 920 aa15.27■□□□□ 0.04
PRPF39-202ENST00000424478 DPP9Q86TI2 863 aa15.27■□□□□ 0.04
PRPF39-202ENST00000424478 FAM133AQ8N9E0 248 aa15.27■□□□□ 0.04
PRPF39-202ENST00000424478 CD99L2Q8TCZ2 262 aa15.27■□□□□ 0.04
PRPF39-202ENST00000424478 TELO2Q9Y4R8 837 aa15.27■□□□□ 0.04
PRPF39-202ENST00000424478 PP2D1A8MPX8 630 aa15.27■□□□□ 0.03
PRPF39-202ENST00000424478 DDX39AO00148 427 aaKnown RBP15.27■□□□□ 0.03
PRPF39-202ENST00000424478 NR3C2P08235 984 aa15.27■□□□□ 0.03
PRPF39-202ENST00000424478 ALDH5A1P51649 535 aaPredicted RBP15.27■□□□□ 0.03
PRPF39-202ENST00000424478 USP49Q70CQ1 688 aa15.27■□□□□ 0.03
PRPF39-202ENST00000424478 PLXNA1Q9UIW2 1896 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 VWA3AA6NCI4 1184 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 PTPREP23469 700 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 TXKP42681 527 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 GBP4Q96PP9 640 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 SPTLC2O15270 562 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 NEMFO60524 1076 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 FOSP01100 380 aaPredicted RBP15.26■□□□□ 0.03
PRPF39-202ENST00000424478 MCM4P33991 863 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 LACTBP83111 547 aaPredicted RBP15.26■□□□□ 0.03
PRPF39-202ENST00000424478 SEPT14Q6ZU15 432 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 DNAJC5GQ8N7S2 189 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 GTF3C2Q8WUA4 911 aaPredicted RBP15.26■□□□□ 0.03
PRPF39-202ENST00000424478 LENG9Q96B70 501 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 PANK2Q9BZ23 570 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 GLT8D2Q9H1C3 349 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
PRPF39-202ENST00000424478 FLRT1Q9NZU1 646 aa15.26■□□□□ 0.03
PRPF39-202ENST00000424478 PFASO15067 1338 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms