RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 CCDC148Q8NFR7 591 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 KIF2CQ99661 725 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 HMX1Q9NP08 348 aaPredicted RBP13.48□□□□□ -0.25
LMO3-206ENST00000424192 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 LIMCH1Q9UPQ0 1083 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 PIK3CDO00329 1044 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 DEXIO95424 95 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 CFBP00751 764 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 IGHA2P01877 340 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 CALML3P27482 149 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 NAPAP54920 295 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 CCT2P78371 535 aaKnown RBP13.47□□□□□ -0.25
LMO3-206ENST00000424192 SSRP1Q08945 709 aaKnown RBP13.47□□□□□ -0.25
LMO3-206ENST00000424192 PFKFB3Q16875 520 aaPredicted RBP13.47□□□□□ -0.25
LMO3-206ENST00000424192 MCTP2Q6DN12 878 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 CMTR1Q8N1G2 835 aaKnown RBP13.47□□□□□ -0.25
LMO3-206ENST00000424192 PIBF1Q8WXW3 757 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 WASF1Q92558 559 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
LMO3-206ENST00000424192 EHMT1Q9H9B1 1298 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 NCOA5Q9HCD5 579 aaKnown RBP13.47□□□□□ -0.25
LMO3-206ENST00000424192 BARHL2Q9NY43 387 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
LMO3-206ENST00000424192 ESYT2A0FGR8 921 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 CYBAP13498 195 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 CCL5P13501 91 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
LMO3-206ENST00000424192 XBP1P17861 261 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 ALDH5A1P51649 535 aaPredicted RBP13.46□□□□□ -0.25
LMO3-206ENST00000424192 CNTN2Q02246 1040 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 SCRN1Q12765 414 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 STK3Q13188 491 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 NTRK3Q16288 839 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 WWC2Q6AWC2 1192 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 ARMCX2Q7L311 632 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 SYTL5Q8TDW5 730 aaPredicted RBP13.46□□□□□ -0.25
LMO3-206ENST00000424192 NSUN6Q8TEA1 469 aaKnown RBP13.46□□□□□ -0.25
LMO3-206ENST00000424192 IWS1Q96ST2 819 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 SLC26A6Q9BXS9 759 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 ABHD16BQ9H3Z7 469 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 OCEL1Q9H607 264 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 VTA1Q9NP79 307 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 PAK6Q9NQU5 681 aaPredicted RBP13.46□□□□□ -0.25
LMO3-206ENST00000424192 SH3GLB2Q9NR46 395 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 FLRT1Q9NZU1 646 aa13.46□□□□□ -0.25
LMO3-206ENST00000424192 V9GY48 417 aaPredicted RBP13.46□□□□□ -0.25
LMO3-206ENST00000424192 ZNFX1Q9P2E3 1918 aaKnown RBP13.45□□□□□ -0.26
LMO3-206ENST00000424192 OPLAHO14841 1288 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 GJB1P08034 283 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 CYP2C19P33261 490 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 ADCY7P51828 1080 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 CACNB2Q08289 660 aaPredicted RBP13.45□□□□□ -0.26
LMO3-206ENST00000424192 NOL8Q76FK4 1167 aaKnown RBP13.45□□□□□ -0.26
LMO3-206ENST00000424192 SMARCC2Q8TAQ2 1214 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 MORC4Q8TE76 937 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
LMO3-206ENST00000424192 PHKBQ93100 1093 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 FGD4Q96M96 766 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 RNF208Q9H0X6 261 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 PSTPIP2Q9H939 334 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
LMO3-206ENST00000424192 LCTP09848 1927 aa13.45□□□□□ -0.26
LMO3-206ENST00000424192 FRMPD4Q14CM0 1322 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 SPDYE3A6NKU9 549 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 STXBP3O00186 592 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 SEPT4O43236 478 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 AKR1A1P14550 325 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 EDNRBP24530 442 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 GNA11P29992 359 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 PDE4DQ08499 809 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 ME3Q16798 604 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 ARHGEF16Q5VV41 709 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 XRRA1Q6P2D8 792 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 RMDN3Q96TC7 470 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 LLPHQ9BRT6 129 aaKnown RBP13.44□□□□□ -0.26
LMO3-206ENST00000424192 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 C6orf50Q9HD87 102 aa13.44□□□□□ -0.26
LMO3-206ENST00000424192 ZHX1Q9UKY1 873 aaPredicted RBP13.44□□□□□ -0.26
LMO3-206ENST00000424192 BAZ2BQ9UIF8 2168 aaKnown RBP13.44□□□□□ -0.26
LMO3-206ENST00000424192 hCG_1642624A0A1W2PR95 340 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 CCDC85CA6NKD9 419 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 PPP1R37O75864 691 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 STAM2O75886 525 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 FOSP01100 380 aaPredicted RBP13.43□□□□□ -0.26
LMO3-206ENST00000424192 HMGN5P82970 282 aaKnown RBP13.43□□□□□ -0.26
LMO3-206ENST00000424192 MTFR1Q15390 333 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 GALNT17Q6IS24 598 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
LMO3-206ENST00000424192 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 PXMP2Q9NR77 195 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
LMO3-206ENST00000424192 FAM184BQ9ULE4 1060 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
LMO3-206ENST00000424192 ASTN1O14525 1302 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 RARBP10826 455 aa13.42□□□□□ -0.26
LMO3-206ENST00000424192 CNGA1P29973 690 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms