RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 DDX39AO00148 427 aaKnown RBP13.36□□□□□ -0.27
PTPRN-204ENST00000423636 MFAP3LO75121 409 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 TBC1D8BQ0IIM8 1120 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 POTEGQ6S5H5 508 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 POTEEQ6S8J3 1075 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 KRT25Q7Z3Z0 450 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 ADSSL1Q8N142 457 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
PTPRN-204ENST00000423636 PDS5AQ29RF7 1337 aaKnown RBP13.35□□□□□ -0.27
PTPRN-204ENST00000423636 MACROD2A1Z1Q3 448 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 PPARDQ03181 441 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 PLS1Q14651 629 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
PTPRN-204ENST00000423636 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 UBXN4Q92575 508 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 CNOT6LQ96LI5 555 aaKnown RBP13.35□□□□□ -0.27
PTPRN-204ENST00000423636 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
PTPRN-204ENST00000423636 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 NLRC4Q9NPP4 1024 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 ADGRG1Q9Y653 693 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 F5H6K3 240 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 ZMYND10O75800 440 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 CFBP00751 764 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 KLRC3Q07444 240 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 CDC37Q16543 378 aaPredicted RBP13.35□□□□□ -0.27
PTPRN-204ENST00000423636 NCAPH2Q6IBW4 605 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 DDX12PQ92771 950 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 SUGCTQ9HAC7 445 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 ZNF446Q9NWS9 450 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 MAGEC2Q9UBF1 373 aaPredicted RBP13.35□□□□□ -0.27
PTPRN-204ENST00000423636 RWDD2AQ9UIY3 292 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 MYH1P12882 1939 aa13.35□□□□□ -0.27
PTPRN-204ENST00000423636 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
PTPRN-204ENST00000423636 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
PTPRN-204ENST00000423636 PSMA7O14818 248 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTPRN-204ENST00000423636 ARL6IP4Q66PJ3 421 aaKnown RBP13.34□□□□□ -0.27
PTPRN-204ENST00000423636 NOC4LQ9BVI4 516 aaKnown RBP13.34□□□□□ -0.27
PTPRN-204ENST00000423636 TMEM39BQ9GZU3 492 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 POLR3GO15318 223 aaPredicted RBP13.34□□□□□ -0.27
PTPRN-204ENST00000423636 ZSCAN12O43309 604 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 PDE6BP35913 854 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 GYS2P54840 703 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 ANKS1AQ92625 1134 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 HAS1Q92839 578 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 RIOX1Q9H6W3 641 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 ABHD10Q9NUJ1 306 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 STX10O60499 249 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 KRT18P05783 430 aaKnown RBP13.34□□□□□ -0.27
PTPRN-204ENST00000423636 CCDC175P0C221 793 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 SV2BQ7L1I2 683 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 PKNOX2Q96KN3 472 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
PTPRN-204ENST00000423636 KBTBD4Q9NVX7 518 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 RGL1Q9NZL6 768 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
PTPRN-204ENST00000423636 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 SMARCAL1Q9NZC9 954 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 CLCN6P51797 869 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 ANKRD20A12PQ8NF67 263 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 LARP4BQ92615 738 aaKnown RBP13.33□□□□□ -0.28
PTPRN-204ENST00000423636 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 SH3GLB2Q9NR46 395 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 ABCB5Q2M3G0 1257 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 DACT2Q5SW24 774 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 ZBTB21Q9ULJ3 1066 aa13.33□□□□□ -0.28
PTPRN-204ENST00000423636 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 RCCD1A6NED2 376 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 ZBTB7AO95365 584 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 NDUFB10O96000 172 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 EGFRP00533 1210 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 TPM1P09493 284 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 PPP2R3AQ06190 1150 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 KRT79Q5XKE5 535 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 TTI2Q6NXR4 508 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 CPXCR1Q8N123 301 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 CUL5Q93034 780 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
PTPRN-204ENST00000423636 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 ZBTB5O15062 677 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 MB21D1Q8N884 522 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
PTPRN-204ENST00000423636 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 ROBO3Q96MS0 1386 aa13.32□□□□□ -0.28
PTPRN-204ENST00000423636 POLD1P28340 1107 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms