RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 RRS1Q15050 365 aaKnown RBP7.6□□□□□ -1.19
LINC00458-201ENST00000423442 DNAJB8Q8NHS0 232 aa7.6□□□□□ -1.19
LINC00458-201ENST00000423442 RAPGEF4Q8WZA2 1011 aa7.6□□□□□ -1.19
LINC00458-201ENST00000423442 SP110Q9HB58 689 aa7.6□□□□□ -1.19
LINC00458-201ENST00000423442 SMG6Q86US8 1419 aaKnown RBP7.6□□□□□ -1.19
LINC00458-201ENST00000423442 MAP2P11137 1827 aaKnown RBP7.59□□□□□ -1.19
LINC00458-201ENST00000423442 FBLN1P23142 703 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 HMGB2P26583 209 aaKnown RBP7.59□□□□□ -1.19
LINC00458-201ENST00000423442 ETV3P41162 512 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 GAB4Q2WGN9 574 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 SLC6A19Q695T7 634 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 MORC1Q86VD1 984 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 JMYQ8N9B5 988 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 NMRK2Q9NPI5 230 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 TACC3Q9Y6A5 838 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 C5P01031 1676 aa7.59□□□□□ -1.19
LINC00458-201ENST00000423442 USP54Q70EL1 1684 aa7.58□□□□□ -1.2
LINC00458-201ENST00000423442 NUAK1O60285 661 aa7.58□□□□□ -1.2
LINC00458-201ENST00000423442 EIF4BP23588 611 aaKnown RBP7.58□□□□□ -1.2
LINC00458-201ENST00000423442 BUD31P41223 144 aaPredicted RBP7.58□□□□□ -1.2
LINC00458-201ENST00000423442 LINC00310P59036 64 aa7.58□□□□□ -1.2
LINC00458-201ENST00000423442 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
LINC00458-201ENST00000423442 SMIM5Q71RC9 77 aa7.58□□□□□ -1.2
LINC00458-201ENST00000423442 ZCRB1Q8TBF4 217 aaKnown RBP7.58□□□□□ -1.2
LINC00458-201ENST00000423442 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
LINC00458-201ENST00000423442 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
LINC00458-201ENST00000423442 RNF19AQ9NV58 838 aa7.58□□□□□ -1.2
LINC00458-201ENST00000423442 TAF1LQ8IZX4 1826 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 KIF20BQ96Q89 1820 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 CICQ96RK0 1608 aaPredicted RBP7.57□□□□□ -1.2
LINC00458-201ENST00000423442 EGR3Q06889 387 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 TIGD5Q53EQ6 642 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 HSP90AB2PQ58FF8 381 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 MCATQ8IVS2 390 aaKnown RBP7.57□□□□□ -1.2
LINC00458-201ENST00000423442 PPP1R13LQ8WUF5 828 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 IRF2BPLQ9H1B7 796 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 DUSP13Q9UII6 198 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 CEP131Q9UPN4 1083 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 IVNS1ABPQ9Y6Y0 642 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 PCNTO95613 3336 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 NSD3Q9BZ95 1437 aa7.57□□□□□ -1.2
LINC00458-201ENST00000423442 RGPD2P0DJD1 1756 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 ZGLP1P0C6A0 271 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 SRFP11831 508 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 TFE3P19532 575 aaPredicted RBP7.56□□□□□ -1.2
LINC00458-201ENST00000423442 GNA15P30679 374 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 LIG3P49916 1009 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 NBPF6Q5VWK0 638 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 NBPF4Q96M43 638 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 FRMD6Q96NE9 622 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 MIR1-1HGQ9H1L0 117 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 TRIT1Q9H3H1 467 aaKnown RBP7.56□□□□□ -1.2
LINC00458-201ENST00000423442 FAM208AQ9UK61 1670 aaKnown RBP7.56□□□□□ -1.2
LINC00458-201ENST00000423442 RTL1A6NKG5 1358 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 FLT4P35916 1363 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 KIF24Q5T7B8 1368 aa7.56□□□□□ -1.2
LINC00458-201ENST00000423442 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 WASHC2AQ641Q2 1341 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 C16orf71Q8IYS4 520 aaPredicted RBP7.55□□□□□ -1.2
LINC00458-201ENST00000423442 PDZD8Q8NEN9 1154 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 JARID2Q92833 1246 aaPredicted RBP7.55□□□□□ -1.2
LINC00458-201ENST00000423442 MCOLN1Q9GZU1 580 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 GPATCH2Q9NW75 528 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 CORINQ9Y5Q5 1042 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 MEGF6O75095 1541 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 N4BP2Q86UW6 1770 aaPredicted RBP7.55□□□□□ -1.2
LINC00458-201ENST00000423442 INSRP06213 1382 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 UBR3Q6ZT12 1888 aa7.55□□□□□ -1.2
LINC00458-201ENST00000423442 UPK3BL1B0FP48 263 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 UPK3BL2E5RIL1 263 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 LRRN2O75325 713 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 PDE4BQ07343 736 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 FSTL1Q12841 308 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 CNGB1Q14028 1251 aaPredicted RBP7.54□□□□□ -1.2
LINC00458-201ENST00000423442 TSPYL5Q86VY4 417 aaPredicted RBP7.54□□□□□ -1.2
LINC00458-201ENST00000423442 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 DTWD2Q8NBA8 298 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 GPR62Q9BZJ7 368 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 POLKQ9UBT6 870 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 TLR6Q9Y2C9 796 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 PCDHA11Q9Y5I1 949 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 KIAA1551Q9HCM1 1747 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 PALLDQ8WX93 1383 aa7.54□□□□□ -1.2
LINC00458-201ENST00000423442 A0A0G2JLW4 131 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 MYOCOSA0A1B0GUC4 107 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 HSPA1AP0DMV8 641 aaKnown RBP7.53□□□□□ -1.2
LINC00458-201ENST00000423442 HSPA1BP0DMV9 641 aaKnown RBP7.53□□□□□ -1.2
LINC00458-201ENST00000423442 HOXA5P20719 270 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 CTSWP56202 376 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 RPL6Q02878 288 aaKnown RBP7.53□□□□□ -1.2
LINC00458-201ENST00000423442 TSNAXIP1Q2TAA8 658 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 ZNF605Q86T29 641 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 ADAM30Q9UKF2 790 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 AK5Q9Y6K8 562 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 PXDNLA1KZ92 1463 aa7.53□□□□□ -1.2
LINC00458-201ENST00000423442 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.2
LINC00458-201ENST00000423442 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.2
LINC00458-201ENST00000423442 DLG4P78352 724 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms