RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 SLC43A3Q8NBI5 491 aa17.97■□□□□ 0.47
SPC24-201ENST00000423327 TMEM87BQ96K49 555 aa17.97■□□□□ 0.47
SPC24-201ENST00000423327 MAP3K14Q99558 947 aa17.97■□□□□ 0.47
SPC24-201ENST00000423327 AP5M1Q9H0R1 490 aa17.97■□□□□ 0.47
SPC24-201ENST00000423327 TBX21Q9UL17 535 aa17.97■□□□□ 0.47
SPC24-201ENST00000423327 ARVCFO00192 962 aa17.96■□□□□ 0.47
SPC24-201ENST00000423327 EIF2AK2P19525 551 aaKnown RBP17.96■□□□□ 0.47
SPC24-201ENST00000423327 LIFRP42702 1097 aa17.96■□□□□ 0.47
SPC24-201ENST00000423327 LRIT3Q3SXY7 679 aa17.96■□□□□ 0.47
SPC24-201ENST00000423327 TCEANC2Q96MN5 208 aa17.96■□□□□ 0.47
SPC24-201ENST00000423327 RMDN3Q96TC7 470 aa17.96■□□□□ 0.47
SPC24-201ENST00000423327 SPZ1Q9BXG8 430 aa17.96■□□□□ 0.47
SPC24-201ENST00000423327 PXMP2Q9NR77 195 aa17.96■□□□□ 0.47
SPC24-201ENST00000423327 LAMA2P24043 3122 aaKnown RBP17.96■□□□□ 0.47
SPC24-201ENST00000423327 PNMA6FA0A0J9YX94 578 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
SPC24-201ENST00000423327 EPHB4P54760 987 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 PSMC6P62333 389 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 EXOSC10Q01780 885 aaKnown RBP17.95■□□□□ 0.46
SPC24-201ENST00000423327 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 TSGA10IPQ3SY00 556 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 C9orf50Q5SZB4 431 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 CCDC62Q6P9F0 684 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
SPC24-201ENST00000423327 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 NSUN6Q8TEA1 469 aaKnown RBP17.95■□□□□ 0.46
SPC24-201ENST00000423327 SCFD2Q8WU76 684 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 PIBF1Q8WXW3 757 aa17.95■□□□□ 0.46
SPC24-201ENST00000423327 LBHD1Q9BQE6 289 aaPredicted RBP17.95■□□□□ 0.46
SPC24-201ENST00000423327 RGS20O76081 388 aa17.94■□□□□ 0.46
SPC24-201ENST00000423327 CD4P01730 458 aa17.94■□□□□ 0.46
SPC24-201ENST00000423327 PURAQ00577 322 aaKnown RBP17.94■□□□□ 0.46
SPC24-201ENST00000423327 SGMS1Q86VZ5 419 aa17.94■□□□□ 0.46
SPC24-201ENST00000423327 CMTR1Q8N1G2 835 aaKnown RBP17.94■□□□□ 0.46
SPC24-201ENST00000423327 OR6J1Q8NGC5 347 aa17.94■□□□□ 0.46
SPC24-201ENST00000423327 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
SPC24-201ENST00000423327 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
SPC24-201ENST00000423327 TMEM39AQ9NV64 488 aa17.94■□□□□ 0.46
SPC24-201ENST00000423327 CCDC69A6NI79 296 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 DCDC2CA8MYV0 355 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 CABYRO75952 493 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 NR3C2P08235 984 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 TXNP10599 105 aaKnown RBP17.93■□□□□ 0.46
SPC24-201ENST00000423327 ITGA7Q13683 1181 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 SHHQ15465 462 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 ARHGEF16Q5VV41 709 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 KCNB2Q92953 911 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 VTI1AQ96AJ9 217 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 NEK1Q96PY6 1258 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 IWS1Q96ST2 819 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 MPHOSPH6Q99547 160 aaKnown RBP17.93■□□□□ 0.46
SPC24-201ENST00000423327 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
SPC24-201ENST00000423327 A6NJR5 290 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 NKRFO15226 690 aaKnown RBP eCLIP17.92■□□□□ 0.46
SPC24-201ENST00000423327 TTLL4Q14679 1199 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 STXBP2Q15833 593 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 LY6KQ17RY6 165 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 RNF20Q5VTR2 975 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 SEPT14Q6ZU15 432 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 TMTC2Q8N394 836 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 BRPF3Q9ULD4 1205 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 FRMPD4Q14CM0 1322 aa17.92■□□□□ 0.46
SPC24-201ENST00000423327 B4DLN1 442 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 ZEB2O60315 1214 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 CPA1P15085 419 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 RAG1P15918 1043 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 SMARCA1P28370 1054 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 KIF5BP33176 963 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 MRPL12P52815 198 aaKnown RBP17.91■□□□□ 0.46
SPC24-201ENST00000423327 ARHGAP1Q07960 439 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 PGM5Q15124 567 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 APOA5Q6Q788 366 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 TMTC3Q6ZXV5 915 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 MICU3Q86XE3 530 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 SAMD3Q8N6K7 520 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 PPP1R13LQ8WUF5 828 aa17.91■□□□□ 0.46
SPC24-201ENST00000423327 ZFP91Q96JP5 570 aaPredicted RBP17.91■□□□□ 0.46
SPC24-201ENST00000423327 MAP3K20Q9NYL2 800 aaKnown RBP17.91■□□□□ 0.46
SPC24-201ENST00000423327 hCG_1642624A0A1W2PR95 340 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 GCOM1H8Y6P7 765 aaPredicted RBP17.9■□□□□ 0.46
SPC24-201ENST00000423327 B4GALT4O60513 344 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 TIMP1P01033 207 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 MYL3P08590 195 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 POLR2MP0CAP2 368 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 HSPA4P34932 840 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 CPT1AP50416 773 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 DHX32Q7L7V1 743 aaKnown RBP17.9■□□□□ 0.46
SPC24-201ENST00000423327 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.464e-6■■■□□ 16.2
SPC24-201ENST00000423327 RRP36Q96EU6 259 aaKnown RBP17.9■□□□□ 0.46
SPC24-201ENST00000423327 TRPV6Q9H1D0 765 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 DDX41Q9UJV9 622 aaKnown RBP17.9■□□□□ 0.46
SPC24-201ENST00000423327 SLC12A7Q9Y666 1083 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 UMODL1Q5DID0 1318 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 CNTNAP5Q8WYK1 1306 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 MYH7BA7E2Y1 1941 aa17.9■□□□□ 0.46
SPC24-201ENST00000423327 EIF3JO75822 258 aaKnown RBP17.89■□□□□ 0.45
SPC24-201ENST00000423327 NEFLP07196 543 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 MMP3P08254 477 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 CALM1P0DP23 149 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms