RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ESYT1Q9BSJ8 1104 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 AMNQ9BXJ7 453 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
USB1-202ENST00000423271 MTMR10Q9NXD2 777 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 CDH23Q9H251 3354 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 ZBTB5O15062 677 aa17.66■□□□□ 0.42
USB1-202ENST00000423271 MYL3P08590 195 aa17.66■□□□□ 0.42
USB1-202ENST00000423271 TROAPQ12815 778 aa17.66■□□□□ 0.42
USB1-202ENST00000423271 SART3Q15020 963 aaKnown RBP17.66■□□□□ 0.42
USB1-202ENST00000423271 RNPC3Q96LT9 517 aaKnown RBP17.66■□□□□ 0.42
USB1-202ENST00000423271 PIGSQ96S52 555 aa17.66■□□□□ 0.42
USB1-202ENST00000423271 MAF1Q9H063 256 aa17.66■□□□□ 0.42
USB1-202ENST00000423271 KIAA1217Q5T5P2 1943 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 B4DLN1 442 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 CYTH3O43739 400 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 B4GALT4O60513 344 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 CFBP00751 764 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 TXNP10599 105 aaKnown RBP17.65■□□□□ 0.42
USB1-202ENST00000423271 EIF2AK2P19525 551 aaKnown RBP17.65■□□□□ 0.42
USB1-202ENST00000423271 CPT1AP50416 773 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 MRPL12P52815 198 aaKnown RBP17.65■□□□□ 0.42
USB1-202ENST00000423271 PURAQ00577 322 aaKnown RBP17.65■□□□□ 0.42
USB1-202ENST00000423271 BMP2KLQ5H9B9 411 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 MFSD5Q6N075 450 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 IGDCC4Q8TDY8 1250 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 NSUN6Q8TEA1 469 aaKnown RBP17.65■□□□□ 0.42
USB1-202ENST00000423271 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 TRPV6Q9H1D0 765 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 RIOX1Q9H6W3 641 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 SCN10AQ9Y5Y9 1956 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 UMODL1Q5DID0 1318 aa17.65■□□□□ 0.42
USB1-202ENST00000423271 NKRFO15226 690 aaKnown RBP eCLIP17.64■□□□□ 0.41
USB1-202ENST00000423271 CSF2RAP15509 400 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 CYP2C18P33260 490 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 HSD17B4P51659 736 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 GHRHRQ02643 423 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 TTLL4Q14679 1199 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 SEPT14Q6ZU15 432 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 PPP1R13LQ8WUF5 828 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 FAM161BQ96MY7 647 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.64■□□□□ 0.41
USB1-202ENST00000423271 MYL10Q9BUA6 226 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 LY9Q9HBG7 655 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 PXMP2Q9NR77 195 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 POLR3EQ9NVU0 708 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 PCDHA1Q9Y5I3 950 aa17.64■□□□□ 0.41
USB1-202ENST00000423271 SLC27A2O14975 620 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 PRC1O43663 620 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 HOXA13P31271 388 aaPredicted RBP17.63■□□□□ 0.41
USB1-202ENST00000423271 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 FAM109BQ6ICB4 259 aaPredicted RBP17.63■□□□□ 0.41
USB1-202ENST00000423271 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 C16orf59Q7L2K0 433 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 CATIPQ7Z7H3 387 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 GUCD1Q96NT3 240 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 IWS1Q96ST2 819 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 MTG1Q9BT17 334 aaPredicted RBP17.63■□□□□ 0.41
USB1-202ENST00000423271 ALDH8A1Q9H2A2 487 aaPredicted RBP17.63■□□□□ 0.41
USB1-202ENST00000423271 ANO2Q9NQ90 1003 aa17.63■□□□□ 0.41
USB1-202ENST00000423271 A6NJR5 290 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 ACRP10323 421 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 SMAD3P84022 425 aaKnown RBP17.62■□□□□ 0.41
USB1-202ENST00000423271 PPIGQ13427 754 aaKnown RBP eCLIP17.62■□□□□ 0.411e-8■□□□□ 8.5
USB1-202ENST00000423271 STXBP2Q15833 593 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 LY6KQ17RY6 165 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 ZNF654Q8IZM8 581 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 PIBF1Q8WXW3 757 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 NOC4LQ9BVI4 516 aaKnown RBP17.62■□□□□ 0.41
USB1-202ENST00000423271 HIPK3Q9H422 1215 aa17.62■□□□□ 0.41
USB1-202ENST00000423271 TRMT13Q9NUP7 481 aaKnown RBP17.62■□□□□ 0.41
USB1-202ENST00000423271 SH2B2O14492 632 aaPredicted RBP17.61■□□□□ 0.41
USB1-202ENST00000423271 NR3C2P08235 984 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 ARHGAP1Q07960 439 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 TMEM240Q5SV17 173 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 ZNF697Q5TEC3 545 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 CASC1Q6TDU7 716 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 TMEM199Q8N511 208 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 AFG1LQ8WV93 481 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 SEZ6LQ9BYH1 1024 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 WNT8AQ9H1J5 351 aa17.61■□□□□ 0.41
USB1-202ENST00000423271 PNMA6FA0A0J9YX94 578 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 DDAH1O94760 285 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 GH1P01241 217 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 MCM5P33992 734 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 CCL23P55773 120 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 NECTIN1Q15223 517 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 NBPF20Q3BBV1 942 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 BRDTQ58F21 947 aaPredicted RBP17.6■□□□□ 0.41
USB1-202ENST00000423271 IL31RAQ8NI17 732 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 PDCD2LQ9BRP1 358 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 STXBP5LQ9Y2K9 1186 aa17.6■□□□□ 0.41
USB1-202ENST00000423271 EIF3JO75822 258 aaKnown RBP17.59■□□□□ 0.41
USB1-202ENST00000423271 MMP3P08254 477 aa17.59■□□□□ 0.41
USB1-202ENST00000423271 CYP2C9P11712 490 aa17.59■□□□□ 0.41
USB1-202ENST00000423271 MYCLP12524 364 aaPredicted RBP17.59■□□□□ 0.41
USB1-202ENST00000423271 RXRAP19793 462 aa17.59■□□□□ 0.41
USB1-202ENST00000423271 FAM47CQ5HY64 1035 aa17.59■□□□□ 0.41
USB1-202ENST00000423271 ZNF365Q70YC5 407 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms