RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ZNF569Q5MCW4 686 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 MIGA2Q7L4E1 593 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 GIMAP8Q8ND71 665 aaPredicted RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 TUBGCP2Q9BSJ2 902 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 LIMA1Q9UHB6 759 aaKnown RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 ZHX1Q9UKY1 873 aaPredicted RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 TFR2Q9UP52 801 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 MAST2Q6P0Q8 1798 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 RHOBTB3O94955 611 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 KRT18P05783 430 aaKnown RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 CT47A1Q5JQC4 288 aaPredicted RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 ZNF772Q68DY9 489 aaPredicted RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 SLC30A10Q6XR72 485 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 GLIS3Q8NEA6 775 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 RIC8AQ9NPQ8 531 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 TTC26A0AVF1 554 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 JAG1P78504 1218 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 PRR16Q569H4 304 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 TEX35Q5T0J7 233 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 CCDC84Q86UT8 332 aaPredicted RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 P2RX5Q93086 422 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 CNOT6LQ96LI5 555 aaKnown RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 NOC4LQ9BVI4 516 aaKnown RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 ZNF277Q9NRM2 450 aaPredicted RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 BCCIPQ9P287 314 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX56-203ENST00000421223 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 E9PMD0 336 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 MEIS1O00470 390 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 KCNJ6P48051 423 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
DDX56-203ENST00000421223 CNKSR1Q969H4 720 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 PNMA5Q96PV4 448 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 PANX2Q96RD6 677 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 LUC7L2Q9Y383 392 aaKnown RBP12.23□□□□□ -0.45
DDX56-203ENST00000421223 ADGRG1Q9Y653 693 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 EDIL3O43854 480 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 UBXN2AP68543 259 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 ECM1Q16610 540 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 NELFCDQ8IXH7 590 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 LARGE2Q8N3Y3 721 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 DDX12PQ92771 950 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 MTMR9Q96QG7 549 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 DHX36Q9H2U1 1008 aaKnown RBP12.23□□□□□ -0.45
DDX56-203ENST00000421223 ABHD10Q9NUJ1 306 aa12.23□□□□□ -0.45
DDX56-203ENST00000421223 PUF60Q9UHX1 559 aaKnown RBP12.23□□□□□ -0.45
DDX56-203ENST00000421223 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 KIF5CO60282 957 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 TFRCP02786 760 aaKnown RBP12.22□□□□□ -0.45
DDX56-203ENST00000421223 ZNF76P36508 570 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 PBX1P40424 430 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 ECE1P42892 770 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 ERVK-24P63145 666 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 KCNB1Q14721 858 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
DDX56-203ENST00000421223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.22□□□□□ -0.45
DDX56-203ENST00000421223 TMOD2Q9NZR1 351 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 CGNQ9P2M7 1197 aaKnown RBP12.22□□□□□ -0.45
DDX56-203ENST00000421223 GUCA1BQ9UMX6 200 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 NDUFB10O96000 172 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 CCNE1P24864 410 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 CNNM4Q6P4Q7 775 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 KIAA0895Q8NCT3 520 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 AGPAT5Q9NUQ2 364 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 STK32BQ9NY57 414 aa12.22□□□□□ -0.45
DDX56-203ENST00000421223 POTEB3A0JP26 581 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 POTECB2RU33 542 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 ZBTB22O15209 634 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 CYP4A11Q02928 519 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 NCAPH2Q6IBW4 605 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 TRMT1LQ7Z2T5 733 aaKnown RBP12.21□□□□□ -0.45
DDX56-203ENST00000421223 HAS1Q92839 578 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 ANO3Q9BYT9 981 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 MMRN2Q9H8L6 949 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 FAM207AQ9NSI2 230 aaPredicted RBP12.21□□□□□ -0.45
DDX56-203ENST00000421223 TRIM10Q9UDY6 481 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 SPDYE3A6NKU9 549 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 YDJCA8MPS7 323 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 CFBP00751 764 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 NOVP48745 357 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 RRP1BQ14684 758 aaKnown RBP12.21□□□□□ -0.45
DDX56-203ENST00000421223 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 SIAH1Q8IUQ4 282 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms