RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ABL1P00519 1130 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 HDLBPQ00341 1268 aaKnown RBP9.87□□□□□ -0.83
SNCA-206ENST00000420646 CXCL9Q07325 125 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 PRR16Q569H4 304 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 FAM83BQ5T0W9 1011 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 ANKRD40Q6AI12 368 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 KIAA0895Q8NCT3 520 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 MTMR8Q96EF0 704 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 TRIM47Q96LD4 638 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 MRIQ9BWK5 157 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 BCAS3Q9H6U6 928 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 E9PMD0 336 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 MEIS1O00470 390 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 DYNC1I1O14576 645 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 GYPCP04921 128 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 HMGB2P26583 209 aaKnown RBP9.87□□□□□ -0.83
SNCA-206ENST00000420646 KLK7P49862 253 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 CCDC112Q8NEF3 446 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 KIFC2Q96AC6 838 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 CALML4Q96GE6 196 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 CDK5RAP3Q96JB5 506 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 FGFBP2Q9BYJ0 223 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 DNAI1Q9UI46 699 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 PCDHA12Q9UN75 941 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 OPLAHO14841 1288 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 BMP3P12645 472 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 COPB1P53618 953 aaKnown RBP9.87□□□□□ -0.83
SNCA-206ENST00000420646 UBXN1Q04323 297 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 PRAMEF18Q5VWM3 479 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 REXO1L1PQ8IX06 675 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 GIMAP8Q8ND71 665 aaPredicted RBP9.87□□□□□ -0.83
SNCA-206ENST00000420646 GMLQ99445 158 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 ANO3Q9BYT9 981 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 RMND1Q9NWS8 449 aa9.87□□□□□ -0.83
SNCA-206ENST00000420646 ZNF215Q9UL58 517 aaPredicted RBP9.87□□□□□ -0.83
SNCA-206ENST00000420646 MYO3BQ8WXR4 1341 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 POTEB3A0JP26 581 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 POTECB2RU33 542 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 FAM86B1E9PN63 330 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 RHOBTB3O94955 611 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 VIL1P09327 827 aaKnown RBP9.86□□□□□ -0.83
SNCA-206ENST00000420646 FAM86B2P0C5J1 330 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 POTEBQ6S5H4 581 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 RAD9BQ6WBX8 426 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 LARP4BQ92615 738 aaKnown RBP9.86□□□□□ -0.83
SNCA-206ENST00000420646 AK8Q96MA6 479 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 EXOC1Q9NV70 894 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 PRR12Q9ULL5 1215 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 KIAA1024Q9UPX6 916 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 PPP2R2CQ9Y2T4 447 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 QSER1Q2KHR3 1735 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 CNTNAP1P78357 1384 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 B4DLN1 442 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 PBX1P40424 430 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 FKBP1AP62942 108 aaKnown RBP9.86□□□□□ -0.83
SNCA-206ENST00000420646 SYDE2Q5VT97 1194 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 SV2BQ7L1I2 683 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 PPFIBP1Q86W92 1011 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 CSGALNACT2Q8N6G5 542 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 DDX12PQ92771 950 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 DUSP9Q99956 384 aaKnown RBP9.86□□□□□ -0.83
SNCA-206ENST00000420646 LZTFL1Q9NQ48 299 aa9.86□□□□□ -0.83
SNCA-206ENST00000420646 AKR1B15C9JRZ8 316 aaPredicted RBP9.85□□□□□ -0.83
SNCA-206ENST00000420646 WNT10BO00744 389 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 RRP9O43818 475 aaKnown RBP9.85□□□□□ -0.83
SNCA-206ENST00000420646 ENTPD3O75355 529 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 CFBP00751 764 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 PSMC6P62333 389 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 CYP4A11Q02928 519 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 TMEM266Q2M3C6 531 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 KRT79Q5XKE5 535 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 TTI2Q6NXR4 508 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 FBXO11Q86XK2 927 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 SUPT20HQ8NEM7 779 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 WDR24Q96S15 920 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 PYM1Q9BRP8 204 aaKnown RBP9.85□□□□□ -0.83
SNCA-206ENST00000420646 SEMA6BQ9H3T3 888 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 MRPL44Q9H9J2 332 aaKnown RBP9.85□□□□□ -0.83
SNCA-206ENST00000420646 TMOD2Q9NZR1 351 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 TFR2Q9UP52 801 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNCA-206ENST00000420646 ARHGAP4P98171 946 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 TRIM65Q6PJ69 517 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 POTEGQ6S5H5 508 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 POTEEQ6S8J3 1075 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 SAMD7Q7Z3H4 446 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 RTKN2Q8IZC4 609 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 DCAF4Q8WV16 495 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 AMNQ9BXJ7 453 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 MYH7BA7E2Y1 1941 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 PSMA7O14818 248 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNCA-206ENST00000420646 FILIP1LQ4L180 1135 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 PPP4R3AQ6IN85 833 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 KIF18AQ8NI77 898 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 CHP1Q99653 195 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 ZHX3Q9H4I2 956 aa9.85□□□□□ -0.83
SNCA-206ENST00000420646 ZNRF3Q9ULT6 936 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms