RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 SYDE2Q5VT97 1194 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 CEP63Q96MT8 703 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 AIFM3Q96NN9 605 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 P4HA1P13674 534 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 ALDH3A1P30838 453 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 KCNB1Q14721 858 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 SND1Q7KZF4 910 aaKnown RBP eCLIP16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 JRKLQ9Y4A0 524 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 DAAM1Q9Y4D1 1078 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 PLCG1P19174 1290 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 KMT5BQ4FZB7 885 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 BBOF1Q8ND07 529 aa16.26■□□□□ 0.19
AP000550.1-201ENST00000420508 SMARCA1P28370 1054 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 LRCH2Q5VUJ6 765 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 TSC1Q92574 1164 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 CCDC114Q96M63 670 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 SLC8A3P57103 927 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 POLR2FP61218 127 aaKnown RBP16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 PPP2R5AQ15172 486 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 PODNQ7Z5L7 613 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 MB21D1Q8N884 522 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 MAK16Q9BXY0 300 aaKnown RBP16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 EDEM3Q9BZQ6 932 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 BARHL2Q9NY43 387 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 LGALS16A8MUM7 142 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 CDC27P30260 824 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 NSMFQ6X4W1 530 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 NEDD1Q8NHV4 660 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 PPP1R14CQ8TAE6 165 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 SPZ1Q9BXG8 430 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 PABPC4Q13310 644 aaKnown RBP eCLIP16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
AP000550.1-201ENST00000420508 A0A1W2PQC6 194 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 ANO9A1A5B4 782 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 K7ENM7 598 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 SERPING1P05155 500 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 SCNN1DP51172 638 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 SETDB1Q15047 1291 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 KRT31Q15323 416 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 SLC35F6Q8N357 371 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 U2AF1L4Q8WU68 220 aaKnown RBP16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 NDUFA10O95299 355 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 NEK9Q8TD19 979 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 IGDCC4Q8TDY8 1250 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 PBKQ96KB5 322 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 CNTNAP4Q9C0A0 1308 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 PDS5AQ29RF7 1337 aaKnown RBP16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 NR2F2P24468 414 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 DAAM2Q86T65 1068 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 EPSTI1Q96J88 318 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 FAM84BQ96KN1 310 aaPredicted RBP16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 JPH2Q9BR39 696 aaPredicted RBP16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 PKD2L1Q9P0L9 805 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 C3P01024 1663 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 NOP56O00567 594 aaKnown RBP16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 DMP1Q13316 513 aaPredicted RBP16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 DOK7Q18PE1 504 aa16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 DHX40Q8IX18 779 aaKnown RBP16.24■□□□□ 0.19
AP000550.1-201ENST00000420508 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 ZBTB5O15062 677 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 STAT2P52630 851 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 USP17L1Q7RTZ2 530 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 KCTD17Q8N5Z5 321 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 FAM20AQ96MK3 541 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 ACCSQ96QU6 501 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 MON2Q7Z3U7 1717 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 NDUFAB1O14561 156 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 DEPTORQ8TB45 409 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 C1orf112Q9NSG2 853 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 TUBE1Q9UJT0 475 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 ZEB2O60315 1214 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 CSRNP1Q96S65 589 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
AP000550.1-201ENST00000420508 EPHB4P54760 987 aa16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 ZBTB8OSQ8IWT0 167 aa16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 RASSF4Q9H2L5 321 aa16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 NDST4Q9H3R1 872 aa16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 MST1RQ04912 1400 aa16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 PDE6CP51160 858 aa16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 SCARF1Q14162 830 aa16.22■□□□□ 0.19
AP000550.1-201ENST00000420508 LONRF2Q1L5Z9 754 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms