RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ANO3Q9BYT9 981 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 CCL15-CCL14A0A0B4J2E2 113 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 BTBD19C9JJ37 291 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 TBX3O15119 743 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 CNMDO75829 334 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 ALDH1A1P00352 501 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 CCL15Q16663 113 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 UBE2SQ16763 222 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 SNRNP48Q6IEG0 339 aaKnown RBP16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 XRRA1Q6P2D8 792 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 CPXCR1Q8N123 301 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 GPT2Q8TD30 523 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 SPATC1LQ9H0A9 340 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 ACAD9Q9H845 621 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 RBPJLQ9UBG7 517 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 MORF4L1Q9UBU8 362 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 FBXO2Q9UK22 296 aaPredicted RBP16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 TCHHQ07283 1943 aa16.21■□□□□ 0.19
SHMT1P1-201ENST00000419974 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 NFIBO00712 420 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 WNT7AO00755 349 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 GADD45BO75293 160 aaPredicted RBP16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 ALAS1P13196 640 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 ME1P48163 572 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 ARHGAP4P98171 946 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 CEBPZQ03701 1054 aaKnown RBP16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 PTGDRQ13258 359 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 Q4G0T1 1027 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 BTBD7Q9P203 1132 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 RIPK3Q9Y572 518 aa16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 DDX49Q9Y6V7 483 aaKnown RBP16.2■□□□□ 0.18
SHMT1P1-201ENST00000419974 LOC102724159A0A0B4J2E5 919 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 PDHXO00330 501 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 PFASO15067 1338 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 CFBP00751 764 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 NBR1Q14596 966 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 PWP2Q15269 919 aaKnown RBP16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 LETM2Q2VYF4 491 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 MUM1L1Q5H9M0 696 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 NIPA1Q7RTP0 329 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 SYTL5Q8TDW5 730 aaPredicted RBP16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 PTPN18Q99952 460 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 MCOLN1Q9GZU1 580 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 NEMFO60524 1076 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 BCRP11274 1271 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 LONP1P36776 959 aaKnown RBP16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 RPS6P62753 249 aaKnown RBP16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 ZNF174Q15697 407 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 RESP18Q5W5W9 173 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 ELOA2Q8IYF1 753 aaPredicted RBP16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 MRPS27Q92552 414 aaKnown RBP16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 TBC1D5Q92609 795 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 AK8Q96MA6 479 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 PARK7Q99497 189 aaKnown RBP16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 MROH8Q9H579 483 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 CYP39A1Q9NYL5 469 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 HPSEQ9Y251 543 aa16.19■□□□□ 0.18
SHMT1P1-201ENST00000419974 CCNT1O60563 726 aaKnown RBP16.18■□□□□ 0.18
SHMT1P1-201ENST00000419974 MCM7P33993 719 aa16.18■□□□□ 0.18
SHMT1P1-201ENST00000419974 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
SHMT1P1-201ENST00000419974 PDIA5Q14554 519 aa16.18■□□□□ 0.18
SHMT1P1-201ENST00000419974 PCNX4Q63HM2 1172 aa16.18■□□□□ 0.18
SHMT1P1-201ENST00000419974 ENGASEQ8NFI3 743 aa16.18■□□□□ 0.18
SHMT1P1-201ENST00000419974 KCNMB3Q9NPA1 279 aa16.18■□□□□ 0.18
SHMT1P1-201ENST00000419974 SLC26A4O43511 780 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 STAM2O75886 525 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 TBC1D8O95759 1140 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 OR52Z1P0C646 297 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 MARCKSP29966 332 aaPredicted RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 FXR2P51116 673 aaKnown RBP eCLIP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 ERVK-9P63128 1117 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 ERVK-24P63145 666 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 CCNA1P78396 465 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 FAM160A1Q05DH4 1040 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 SNW1Q13573 536 aaKnown RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 SHC4Q6S5L8 630 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 DTHD1Q6ZMT9 781 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 ABRAQ8N0Z2 381 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 GPRC5AQ8NFJ5 357 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 FAM20AQ96MK3 541 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 TIGD1Q96MW7 591 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 IWS1Q96ST2 819 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 MOV10L1Q9BXT6 1211 aaKnown RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 TXNRD2Q9NNW7 524 aa16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 DDX19AQ9NUU7 478 aaKnown RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
SHMT1P1-201ENST00000419974 ADGRA2Q96PE1 1338 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 IGLV3-22A0A075B6J6 115 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms