RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 RMDN3Q96TC7 470 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 WDR11Q9BZH6 1224 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 ATP11BQ9Y2G3 1177 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 ASGR1P07306 291 aa23.52■■□□□ 1.36
GTF3A-202ENST00000419181 CMTR1Q8N1G2 835 aaKnown RBP23.52■■□□□ 1.36
GTF3A-202ENST00000419181 PIBF1Q8WXW3 757 aa23.52■■□□□ 1.36
GTF3A-202ENST00000419181 JAKMIP1Q96N16 626 aaKnown RBP23.52■■□□□ 1.36
GTF3A-202ENST00000419181 IWS1Q96ST2 819 aa23.52■■□□□ 1.36
GTF3A-202ENST00000419181 BRPF3Q9ULD4 1205 aa23.52■■□□□ 1.36
GTF3A-202ENST00000419181 KIAA1217Q5T5P2 1943 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 FXR1P51114 621 aaKnown RBP eCLIP23.51■■□□□ 1.35
GTF3A-202ENST00000419181 BEX3Q00994 111 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 SYNE3Q6ZMZ3 975 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 TMTC3Q6ZXV5 915 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 GDF15Q99988 308 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 AP5M1Q9H0R1 490 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 STARD7Q9NQZ5 370 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 PXMP2Q9NR77 195 aa23.51■■□□□ 1.35
GTF3A-202ENST00000419181 DYNC1LI2O43237 492 aaPredicted RBP23.5■■□□□ 1.35
GTF3A-202ENST00000419181 CPA1P15085 419 aa23.5■■□□□ 1.35
GTF3A-202ENST00000419181 HOXA13P31271 388 aaPredicted RBP23.5■■□□□ 1.35
GTF3A-202ENST00000419181 FSCN1Q16658 493 aaKnown RBP23.5■■□□□ 1.35
GTF3A-202ENST00000419181 ARHGEF16Q5VV41 709 aa23.5■■□□□ 1.35
GTF3A-202ENST00000419181 SCFD2Q8WU76 684 aa23.5■■□□□ 1.35
GTF3A-202ENST00000419181 GLT1D1Q96MS3 346 aa23.5■■□□□ 1.35
GTF3A-202ENST00000419181 SEC63Q9UGP8 760 aaKnown RBP23.5■■□□□ 1.35
GTF3A-202ENST00000419181 ELP1O95163 1332 aa23.5■■□□□ 1.35
GTF3A-202ENST00000419181 LTBP2Q14767 1821 aa23.49■■□□□ 1.35
GTF3A-202ENST00000419181 GCOM1H8Y6P7 765 aaPredicted RBP23.49■■□□□ 1.35
GTF3A-202ENST00000419181 POLR2MP0CAP2 368 aa23.49■■□□□ 1.35
GTF3A-202ENST00000419181 EIF2AK2P19525 551 aaKnown RBP23.49■■□□□ 1.35
GTF3A-202ENST00000419181 PPP2R5BQ15173 497 aa23.49■■□□□ 1.35
GTF3A-202ENST00000419181 STXBP2Q15833 593 aa23.49■■□□□ 1.35
GTF3A-202ENST00000419181 BLOC1S2Q6QNY1 142 aa23.49■■□□□ 1.35
GTF3A-202ENST00000419181 PCDH10Q9P2E7 1040 aa23.49■■□□□ 1.35
GTF3A-202ENST00000419181 NKRFO15226 690 aaKnown RBP eCLIP23.48■■□□□ 1.35
GTF3A-202ENST00000419181 ZBTB43O43298 467 aa23.48■■□□□ 1.35
GTF3A-202ENST00000419181 MAGEA10P43363 369 aaPredicted RBP23.48■■□□□ 1.35
GTF3A-202ENST00000419181 RCAN1P53805 252 aa23.48■■□□□ 1.35
GTF3A-202ENST00000419181 TLE2Q04725 743 aa23.48■■□□□ 1.35
GTF3A-202ENST00000419181 USP26Q9BXU7 913 aa23.48■■□□□ 1.35
GTF3A-202ENST00000419181 RBM28Q9NW13 759 aaKnown RBP23.48■■□□□ 1.35
GTF3A-202ENST00000419181 KLF18A0A0U1RQI7 1052 aa23.47■■□□□ 1.35
GTF3A-202ENST00000419181 NR3C2P08235 984 aa23.47■■□□□ 1.35
GTF3A-202ENST00000419181 RPS6KB1P23443 525 aa23.47■■□□□ 1.35
GTF3A-202ENST00000419181 FBXL16Q8N461 479 aa23.47■■□□□ 1.35
GTF3A-202ENST00000419181 CCDC82Q8N4S0 544 aa23.47■■□□□ 1.35
GTF3A-202ENST00000419181 PDCD2LQ9BRP1 358 aa23.47■■□□□ 1.35
GTF3A-202ENST00000419181 PDLIM7Q9NR12 457 aa23.47■■□□□ 1.35
GTF3A-202ENST00000419181 ARIH2O95376 493 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 TXNP10599 105 aaKnown RBP23.46■■□□□ 1.35
GTF3A-202ENST00000419181 PSMA5P28066 241 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 BMP8BP34820 402 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 FGD1P98174 961 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 TTLL4Q14679 1199 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 RTN1Q16799 776 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 CCDC62Q6P9F0 684 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 CXCL17Q6UXB2 119 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 Q6ZUG5 572 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 ANKRD33Q7Z3H0 272 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 CNTNAP5Q8WYK1 1306 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 PRKAG2Q9UGJ0 569 aa23.46■■□□□ 1.35
GTF3A-202ENST00000419181 A0A0U1RQG5 324 aaPredicted RBP23.45■■□□□ 1.34
GTF3A-202ENST00000419181 A0A1W2PPC1 479 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 hCG_1642624A0A1W2PR95 340 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 ZEB2O60315 1214 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 PQBP1O60828 265 aaKnown RBP23.45■■□□□ 1.34
GTF3A-202ENST00000419181 EIF3JO75822 258 aaKnown RBP23.45■■□□□ 1.34
GTF3A-202ENST00000419181 CABYRO75952 493 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
GTF3A-202ENST00000419181 FUT2Q10981 343 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 PGM5Q15124 567 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 SEPT14Q6ZU15 432 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 OR6J1Q8NGC5 347 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 TOX2Q96NM4 488 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 AGXT2Q9BYV1 514 aa23.45■■□□□ 1.34
GTF3A-202ENST00000419181 FRMPD4Q14CM0 1322 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 GOLGA8AA7E2F4 631 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 GOLGA8BA8MQT2 603 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 CLTBP09497 229 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 CDK7P50613 346 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 SH3RF1Q7Z6J0 888 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 VSIG10LQ86VR7 867 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 FCHSD1Q86WN1 690 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 IL31RAQ8NI17 732 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 COPS5Q92905 334 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 BRF1Q92994 677 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 VTI1AQ96AJ9 217 aa23.44■■□□□ 1.34
GTF3A-202ENST00000419181 PRDM5Q9NQX1 630 aaPredicted RBP23.44■■□□□ 1.34
GTF3A-202ENST00000419181 FAM217BQ9NTX9 383 aaPredicted RBP23.44■■□□□ 1.34
GTF3A-202ENST00000419181 MROH7Q68CQ1 1323 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 TRIM43BA6NCK2 446 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 ARVCFO00192 962 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 PIK3CDO00329 1044 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 CDC27P30260 824 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 CPT1AP50416 773 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 APOBRQ0VD83 1088 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 TRIM43Q96BQ3 446 aaPredicted RBP23.43■■□□□ 1.34
GTF3A-202ENST00000419181 LAMA3Q16787 3333 aa23.43■■□□□ 1.34
GTF3A-202ENST00000419181 NID2Q14112 1375 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms