RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SYNPOQ8N3V7 929 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 LZTR1Q8N653 840 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 USP33Q8TEY7 942 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 FAM168AQ92567 244 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 DPF3Q92784 378 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 INTS4Q96HW7 963 aaKnown RBP3.86□□□□□ -1.79
VPS41-206ENST00000418457 ZFYVE21Q9BQ24 234 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 MRPL4Q9BYD3 311 aaKnown RBP3.86□□□□□ -1.79
VPS41-206ENST00000418457 SLC6A17Q9H1V8 727 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 NCOA5Q9HCD5 579 aaKnown RBP3.86□□□□□ -1.79
VPS41-206ENST00000418457 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.86□□□□□ -1.79
VPS41-206ENST00000418457 MARCH2Q9P0N8 246 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 NDOR1Q9UHB4 597 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 SFMBT1Q9UHJ3 866 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 TRAF6Q9Y4K3 522 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 ASXL2Q76L83 1435 aa3.86□□□□□ -1.79
VPS41-206ENST00000418457 ENPP3O14638 875 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 PLD2O14939 933 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 PPP1R12AO14974 1030 aaPredicted RBP3.85□□□□□ -1.79
VPS41-206ENST00000418457 MSCO60682 206 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 PPP1R11O60927 126 aaPredicted RBP3.85□□□□□ -1.79
VPS41-206ENST00000418457 FUCA1P04066 466 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 MPOP05164 745 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 NAT1P18440 290 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 PDE6BP35913 854 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 FNDC3BQ53EP0 1204 aaKnown RBP3.85□□□□□ -1.79
VPS41-206ENST00000418457 TRIM61Q5EBN2 209 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 ADGRF1Q5T601 910 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 BICRALQ6AI39 1079 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 MPZL3Q6UWV2 235 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 CEP68Q76N32 757 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 MTDHQ86UE4 582 aaKnown RBP3.85□□□□□ -1.79
VPS41-206ENST00000418457 CABP7Q86V35 215 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 TEX2Q8IWB9 1127 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.85□□□□□ -1.79
VPS41-206ENST00000418457 TRMT2BQ96GJ1 504 aaKnown RBP3.85□□□□□ -1.79
VPS41-206ENST00000418457 TMEM169Q96HH4 297 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 MTA3Q9BTC8 594 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 SLC52A2Q9HAB3 445 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 CLDND1Q9NY35 253 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 FBXL7Q9UJT9 491 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 SHROOM4Q9ULL8 1493 aa3.85□□□□□ -1.79
VPS41-206ENST00000418457 OR14I1A6ND48 311 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 C22orf46C9J442 243 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 H7BY64 318 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 SMARCA5O60264 1052 aaPredicted RBP3.84□□□□□ -1.79
VPS41-206ENST00000418457 CLSTN1O94985 981 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 RAPGEF3O95398 923 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 FPR2P25090 351 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 HSD3B2P26439 372 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 ERVFRD-1P60508 538 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 GUCY1A3Q02108 690 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 CBX2Q14781 532 aaPredicted RBP3.84□□□□□ -1.79
VPS41-206ENST00000418457 KIZQ2M2Z5 673 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 LBX2Q6XYB7 198 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 BRAPQ7Z569 592 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 NLRP10Q86W26 655 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 IRF2BP1Q8IU81 584 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 Q8N1Y9 231 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 GSTCDQ8NEC7 633 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 SLC7A14Q8TBB6 771 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 PLEKHO2Q8TD55 490 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 ALG1Q9BT22 464 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 TNFRSF12AQ9NP84 129 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 FAM53CQ9NYF3 392 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 COA3Q9Y2R0 106 aaPredicted RBP3.84□□□□□ -1.79
VPS41-206ENST00000418457 CARMIL2Q6F5E8 1435 aa3.84□□□□□ -1.79
VPS41-206ENST00000418457 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.83□□□□□ -1.8
VPS41-206ENST00000418457 ZNF503-AS2A6NEH8 195 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 NUDT19A8MXV4 375 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 SRGAP3O43295 1099 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 KCNQ2O43526 872 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 RFPL3O75679 317 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 CRTAMO95727 393 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 CYBBP04839 570 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 DBHP09172 617 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 GLI4P10075 376 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 SDHBP21912 280 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 GRK2P25098 689 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 GRK3P35626 688 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 TMEM62Q0P6H9 643 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 PABPC4Q13310 644 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS41-206ENST00000418457 NR1I3Q14994 352 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 RAB3GAP1Q15042 981 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 TKFCQ3LXA3 575 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 PLEKHG4Q58EX7 1191 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 XP32Q5T750 250 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 MROH9Q5TGP6 573 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 WWC2Q6AWC2 1192 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 MCTP1Q6DN14 999 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 RIOX2Q8IUF8 465 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 LIN37Q96GY3 246 aaPredicted RBP3.83□□□□□ -1.8
VPS41-206ENST00000418457 MAGEB10Q96LZ2 347 aaPredicted RBP3.83□□□□□ -1.8
VPS41-206ENST00000418457 FEZ1Q99689 392 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 PPARGC1AQ9UBK2 798 aaKnown RBP3.83□□□□□ -1.8
VPS41-206ENST00000418457 FBLN5Q9UBX5 448 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 DBR1Q9UK59 544 aaKnown RBP3.83□□□□□ -1.8
VPS41-206ENST00000418457 NUDT5Q9UKK9 219 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 PCDHA9Q9Y5H5 950 aa3.83□□□□□ -1.8
VPS41-206ENST00000418457 PCDHA8Q9Y5H6 950 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms