RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ASGR1P07306 291 aa23.9■■□□□ 1.42
PKNOX1-202ENST00000418336 BEX3Q00994 111 aa23.9■■□□□ 1.42
PKNOX1-202ENST00000418336 LZTS2Q9BRK4 669 aa23.9■■□□□ 1.42
PKNOX1-202ENST00000418336 PXMP2Q9NR77 195 aa23.9■■□□□ 1.42
PKNOX1-202ENST00000418336 MAP3K20Q9NYL2 800 aaKnown RBP23.9■■□□□ 1.42
PKNOX1-202ENST00000418336 FRMPD4Q14CM0 1322 aa23.89■■□□□ 1.42
PKNOX1-202ENST00000418336 RGS20O76081 388 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 CDK7P50613 346 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 PDE4DQ08499 809 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 CCDC62Q6P9F0 684 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 MICU3Q86XE3 530 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 NSUN6Q8TEA1 469 aaKnown RBP23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 IWS1Q96ST2 819 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 RMDN3Q96TC7 470 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 WDR11Q9BZH6 1224 aa23.89■■□□□ 1.41
PKNOX1-202ENST00000418336 CNTNAP5Q8WYK1 1306 aa23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 HMGB1P09429 215 aaKnown RBP23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 HOXA13P31271 388 aaPredicted RBP23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 GNAQP50148 359 aa23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 IL31RAQ8NI17 732 aa23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 PIBF1Q8WXW3 757 aa23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 JAKMIP1Q96N16 626 aaKnown RBP23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 PDLIM7Q9NR12 457 aa23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 ATP11BQ9Y2G3 1177 aa23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 NID2Q14112 1375 aa23.88■■□□□ 1.41
PKNOX1-202ENST00000418336 GRIN2DO15399 1336 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 ELP1O95163 1332 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 TRIM43BA6NCK2 446 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 DYNC1LI2O43237 492 aaPredicted RBP23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 EIF2AK2P19525 551 aaKnown RBP23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 BMP8BP34820 402 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 MAGEA10P43363 369 aaPredicted RBP23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 GNASQ5JWF2 1037 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 SH3RF1Q7Z6J0 888 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 SLC43A3Q8NBI5 491 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 PCSK9Q8NBP7 692 aaKnown RBP23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 COPS5Q92905 334 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 TRIM43Q96BQ3 446 aaPredicted RBP23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 PDCD2LQ9BRP1 358 aa23.87■■□□□ 1.41
PKNOX1-202ENST00000418336 hCG_1642624A0A1W2PR95 340 aa23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 NR3C2P08235 984 aa23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 RPS6KB1P23443 525 aa23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 CDC27P30260 824 aa23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 TLE2Q04725 743 aa23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 FSCN1Q16658 493 aaKnown RBP23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 ANKRD33Q7Z3H0 272 aa23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 RRP36Q96EU6 259 aaKnown RBP23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 STARD7Q9NQZ5 370 aa23.86■■□□□ 1.41
PKNOX1-202ENST00000418336 MEIS2O14770 477 aa23.85■■□□□ 1.41
PKNOX1-202ENST00000418336 ITGB8P26012 769 aa23.85■■□□□ 1.41
PKNOX1-202ENST00000418336 RCAN1P53805 252 aa23.85■■□□□ 1.41
PKNOX1-202ENST00000418336 PGM5Q15124 567 aa23.85■■□□□ 1.41
PKNOX1-202ENST00000418336 Q6ZUG5 572 aa23.85■■□□□ 1.41
PKNOX1-202ENST00000418336 SCFD2Q8WU76 684 aa23.85■■□□□ 1.41
PKNOX1-202ENST00000418336 SPC25Q9HBM1 224 aa23.85■■□□□ 1.41
PKNOX1-202ENST00000418336 KLF18A0A0U1RQI7 1052 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 GCOM1H8Y6P7 765 aaPredicted RBP23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 POLR2MP0CAP2 368 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 EVCP57679 992 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 FAAP100Q0VG06 881 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 TRAF1Q13077 416 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 ARHGEF16Q5VV41 709 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 TYW1BQ6NUM6 668 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 CXCL17Q6UXB2 119 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 VSIG10LQ86VR7 867 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 ZSWIM6Q9HCJ5 1215 aa23.84■■□□□ 1.41
PKNOX1-202ENST00000418336 PIK3CDO00329 1044 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 NKRFO15226 690 aaKnown RBP eCLIP23.83■■□□□ 1.412e-8■■■□□ 19.1
PKNOX1-202ENST00000418336 ZBTB43O43298 467 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 FXR1P51114 621 aaKnown RBP eCLIP23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 APOBRQ0VD83 1088 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 STXBP2Q15833 593 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 BLOC1S2Q6QNY1 142 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 NOL8Q76FK4 1167 aaKnown RBP23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 CCDC82Q8N4S0 544 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 BRF1Q92994 677 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 TOX2Q96NM4 488 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 AP5M1Q9H0R1 490 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 RBM28Q9NW13 759 aaKnown RBP23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 SCN10AQ9Y5Y9 1956 aa23.83■■□□□ 1.41
PKNOX1-202ENST00000418336 A6NJR5 290 aa23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 EIF3JO75822 258 aaKnown RBP23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 ARHGAP1Q07960 439 aa23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 TOB2Q14106 344 aaPredicted RBP23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 PPP2R5BQ15173 497 aa23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 RTN1Q16799 776 aa23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 USP17L6PQ6QN14 398 aa23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 GLT1D1Q96MS3 346 aa23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 MPHOSPH6Q99547 160 aaKnown RBP23.82■■□□□ 1.4
PKNOX1-202ENST00000418336 A0A0U1RQG5 324 aaPredicted RBP23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 B4DLN1 442 aa23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 ARVCFO00192 962 aa23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 TXNP10599 105 aaKnown RBP23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 CASTP20810 708 aaKnown RBP23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 MRPL12P52815 198 aaKnown RBP23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 MRPS9P82933 396 aaKnown RBP23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 PURAQ00577 322 aaKnown RBP23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 LY6KQ17RY6 165 aa23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 WWC2Q6AWC2 1192 aa23.81■■□□□ 1.4
PKNOX1-202ENST00000418336 DDX41Q9UJV9 622 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms