RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ZNF594Q96JF6 807 aaPredicted RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 TUBGCP2Q9BSJ2 902 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.87□□□□□ -0.991e-6■■■■□ 21.2
HMGXB4-202ENST00000418170 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.87□□□□□ -0.994e-6■■■■□ 21.4
HMGXB4-202ENST00000418170 SNUPNO95149 360 aaKnown RBP8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 GSTA1P08263 222 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 KIF11P52732 1056 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 PPP2R2AP63151 447 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 SLC39A6Q13433 755 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 EARS2Q5JPH6 523 aaKnown RBP8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 KLHDC7AQ5VTJ3 777 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 RUFY4Q6ZNE9 571 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 CEP126Q9P2H0 1117 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 CORO1CQ9ULV4 474 aaPredicted RBP8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 PLAGL2Q9UPG8 496 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 AKAP11Q9UKA4 1901 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 WNT7AO00755 349 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 TRIM37O94972 964 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 DRD4P21917 467 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 HSD17B3P37058 310 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 HSPA2P54652 639 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 ZNF844Q08AG5 666 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 CCDC82Q8N4S0 544 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 L3MBTL3Q96JM7 780 aaPredicted RBP8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 SLC12A4Q9UP95 1085 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 PHLPP1O60346 1717 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 CCT8L1PA6NM43 557 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 PJA2O43164 708 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 ORC4O43929 436 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 ADD2P35612 726 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 ATP2C1P98194 919 aaPredicted RBP8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 CPLX4Q7Z7G2 160 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 NOC3LQ8WTT2 800 aaKnown RBP8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 SHISA4Q96DD7 197 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 TRIM47Q96LD4 638 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
HMGXB4-202ENST00000418170 F8W031 263 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 BACH1O14867 736 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 LIN7AO14910 233 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PECAM1P16284 738 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 TRADDQ15628 312 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 AGBL2Q5U5Z8 902 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 CMTR1Q8N1G2 835 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 CCDC63Q8NA47 563 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 TCP11Q8WWU5 503 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ZNF570Q96NI8 536 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PUS3Q9BZE2 481 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 INCENPQ9NQS7 918 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 CNOT8Q9UFF9 292 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 SALL4Q9UJQ4 1053 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 MYH7BA7E2Y1 1941 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ERICH2A1L162 156 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 MYBP10242 640 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 KRT2P35908 639 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 SSR1P43307 286 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 UAP1Q16222 522 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 TYW1BQ6NUM6 668 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 TTI2Q6NXR4 508 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PI16Q6UXB8 463 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PLBD2Q8NHP8 589 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ZBTB10Q96DT7 871 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 IQCDQ96DY2 449 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ERGIC2Q96RQ1 377 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 NOP53Q9NZM5 478 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 GOLGB1Q14789 3259 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 TIAM2Q8IVF5 1701 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 CFAP73A6NFT4 308 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PHF20L1A8MW92 1017 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ALADP13716 330 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PTGDRQ13258 359 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 FAM43BQ6ZT52 329 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 RNF10Q8N5U6 811 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 KRT12Q99456 494 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 UBAC1Q9BSL1 405 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 SWAP70Q9UH65 585 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 L3MBTL1Q9Y468 752 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ENO4A6NNW6 628 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PSMA7O14818 248 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ZNF268Q14587 947 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ZNF174Q15697 407 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 OR2W6PQ8NHA6 318 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 MTMR8Q96EF0 704 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PCMTD1Q96MG8 357 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 NOX5Q96PH1 765 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 PHF20Q9BVI0 1012 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 ISCUQ9H1K1 167 aa8.85□□□□□ -0.99
HMGXB4-202ENST00000418170 AP1G2O75843 785 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CLTAP09496 248 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 XBP1P17861 261 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 ECHS1P30084 290 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 EIF4A3P38919 411 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 RCAN1P53805 252 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 TRAF1Q13077 416 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 ODF2Q5BJF6 829 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 292.2 ms