RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 TXNP10599 105 aaKnown RBP9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CALML3P27482 149 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SLC16A2P36021 539 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CTDSPL2Q05D32 466 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PTGISQ16647 500 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SYDE2Q5VT97 1194 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TTBK2Q6IQ55 1244 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RNF207Q6ZRF8 634 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 DNERQ8NFT8 737 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CAGE1Q8TC20 777 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 FSD1Q9BTV5 496 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 INCENPQ9NQS7 918 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ORC4O43929 436 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 LPXNO60711 386 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TOP1P11387 765 aaKnown RBP9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 NOVP48745 357 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CHMP4BP1P59074 171 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RPS6P62753 249 aaKnown RBP9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 AFAP1L1Q8TED9 768 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CLEC4DQ8WXI8 215 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ANAPC4Q9UJX5 808 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RCAN3Q9UKA8 241 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 REV3LO60673 3130 aa9.26□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TANC1Q9C0D5 1861 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ABHD14A-ACY1A0A1B0GW23 586 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PI4K2BG5E9Z4 385 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 EFCAB14O75071 495 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ARHGEF15O94989 841 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 FGRP09769 529 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SELPP16109 830 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 EDNRBP24530 442 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 WDR5P61964 334 aaKnown RBP9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SLC30A10Q6XR72 485 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RASGRP2Q7LDG7 609 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RGS22Q8NE09 1264 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PPP1R13LQ8WUF5 828 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 COPS5Q92905 334 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RAD9AQ99638 391 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TMEM47Q9BQJ4 181 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TOMM22Q9NS69 142 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TCP11L1Q9NUJ3 509 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 MUC6Q6W4X9 2439 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 FRMPD2Q68DX3 1309 aaPredicted RBP9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PIEZO1Q92508 2521 aa9.25□□□□□ -0.93
HLA-DPA1-241ENST00000417724 LCHNA4D1U4 455 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GH1P01241 217 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CASTP20810 708 aaKnown RBP9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ERVK-21P61565 698 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 IKBKEQ14164 716 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ALX1Q15699 326 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 C20orf194Q5TEA3 1177 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CNKSR3Q6P9H4 555 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 LRRC8DQ7L1W4 858 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SESTD1Q86VW0 696 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PI4K2BQ8TCG2 481 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 AFG1LQ8WV93 481 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TTC14Q96N46 770 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TGS1Q96RS0 853 aaKnown RBP9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CRBNQ96SW2 442 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 MAF1Q9H063 256 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SUGCTQ9HAC7 445 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 C11orf16Q9NQ32 467 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 WDR19Q8NEZ3 1342 aa9.24□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PTPRSQ13332 1948 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 FOXP2O15409 715 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GJB5O95377 273 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CXCL10P02778 98 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PDHBP11177 359 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CKBP12277 381 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RBL2Q08999 1139 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ZNF543Q08ER8 600 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GPNMBQ14956 572 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 DGKDQ16760 1214 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 RRP12Q5JTH9 1297 aaKnown RBP9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CCDC62Q6P9F0 684 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SEPT14Q6ZU15 432 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SPRED2Q7Z698 418 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 TMCO2Q7Z6W1 182 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 FAM178BQ8IXR5 827 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 MIER1Q8N108 512 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GJD3Q8N144 294 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 C7orf31Q8N865 590 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 NSUN6Q8TEA1 469 aaKnown RBP9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GDPD5Q8WTR4 605 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 UBE2ZQ9H832 354 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CD320Q9NPF0 282 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 MTUS1Q9ULD2 1270 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 MYH7BA7E2Y1 1941 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 KIAA1217Q5T5P2 1943 aa9.23□□□□□ -0.93
HLA-DPA1-241ENST00000417724 LINC01553A4QN01 128 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 FAM86C2PA6NEL3 165 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PRR33A8MZF0 331 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 NBNO60934 754 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ARIH2O95376 493 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 FGAP02671 866 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms