RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 SPRED3Q2MJR0 410 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 BEND3Q5T5X7 828 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 CCDC129Q6ZRS4 1044 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 CACNA2D4Q7Z3S7 1137 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 MAATS1Q7Z4T9 603 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 ANKS4BQ8N8V4 417 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 KRI1Q8N9T8 703 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 SPATA4Q8NEY3 305 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 WHAMMQ8TF30 809 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 NOC3LQ8WTT2 800 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 EAF2Q96CJ1 260 aaPredicted RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 MED15Q96RN5 788 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 EPAS1Q99814 870 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 NDST4Q9H3R1 872 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 TMBIM4Q9HC24 238 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 NRXN2Q9P2S2 1712 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 SNX12Q9UMY4 172 aa6.53□□□□□ -1.36
NPHP1-204ENST00000417665 REXO2Q9Y3B8 237 aaKnown RBP6.53□□□□□ -1.36
NPHP1-204ENST00000417665 AFDNP55196 1824 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 DIAPH2O60879 1101 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CLTAP09496 248 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 POTEIP0CG38 1075 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 POTEJP0CG39 1038 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 PYGBP11216 843 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 TCP1P17987 556 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 ALDH3A1P30838 453 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 ABCD1P33897 745 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 PAFAH1B1P43034 410 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 MRPS35P82673 323 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 IMMTQ16891 758 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 C8orf74Q6P047 294 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CPLX4Q7Z7G2 160 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CREG2Q8IUH2 290 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 IFNL2Q8IZJ0 200 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CCDC197Q8NCU1 140 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 SPATA20Q8TB22 786 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 NECTIN2Q92692 538 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 DSCC1Q9BVC3 393 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 OSBPL1AQ9BXW6 950 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CCDC8Q9H0W5 538 aaPredicted RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 TAF1DQ9H5J8 278 aaPredicted RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 ANKIB1Q9P2G1 1089 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 TRIM10Q9UDY6 481 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 LIMA1Q9UHB6 759 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 SLC12A4Q9UP95 1085 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 COL15A1P39059 1388 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 LRRC10BA6NIK2 292 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 GCOM1H8Y6P7 765 aaPredicted RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CPLX1O14810 134 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 N4BP3O15049 544 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 ZNF185O15231 689 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 ATP2C2O75185 946 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 KIF4AO95239 1232 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 MYZAPP0CAP1 466 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 HERVK_113P62684 666 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 MXRA7P84157 204 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 LMNB2Q03252 620 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 BYSLQ13895 437 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 ITIH4Q14624 930 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 LBRQ14739 615 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 SETDB1Q15047 1291 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CDC37Q16543 378 aaPredicted RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 GNPTABQ3T906 1256 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 HAUS3Q68CZ6 603 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 DPY19L2Q6NUT2 758 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 RUFY4Q6ZNE9 571 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 PNMA8AQ86V59 439 aaPredicted RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 LMNTD2Q8IXW0 634 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 NBPF15Q8N660 670 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CCDC155Q8N6L0 562 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 AGAP11Q8TF27 550 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 HDAC7Q8WUI4 952 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 RBM41Q96IZ5 413 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 PLEKHG4BQ96PX9 1271 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 PURBQ96QR8 312 aaKnown RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 MAP3K14Q99558 947 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 TRIM4Q9C037 500 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 GDF3Q9NR23 364 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CWC25Q9NXE8 425 aaPredicted RBP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.52□□□□□ -1.37
NPHP1-204ENST00000417665 SLC12A6Q9UHW9 1150 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 CEP131Q9UPN4 1083 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 PCDHGA4Q9Y5G9 962 aa6.52□□□□□ -1.37
NPHP1-204ENST00000417665 FER1L6Q2WGJ9 1857 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 ERVV-2B6SEH9 535 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 E7EWF7 191 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 ZSCAN9O15535 394 aaPredicted RBP6.51□□□□□ -1.37
NPHP1-204ENST00000417665 ORC4O43929 436 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 TACC1O75410 805 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 A1BGP04217 495 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 HPDP32754 393 aaPredicted RBP6.51□□□□□ -1.37
NPHP1-204ENST00000417665 CRKLP46109 303 aaKnown RBP6.51□□□□□ -1.37
NPHP1-204ENST00000417665 SFSWAPQ12872 951 aaKnown RBP6.51□□□□□ -1.37
NPHP1-204ENST00000417665 CUL4BQ13620 913 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 TAF7Q15545 349 aaPredicted RBP6.51□□□□□ -1.37
NPHP1-204ENST00000417665 QPCTQ16769 361 aa6.51□□□□□ -1.37
NPHP1-204ENST00000417665 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms