RNA–Protein interactions for RNA: ENST00000417504.5

PTPA-211, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-211ENST00000417504 PRR20CP86479 221 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 PRR20DP86480 221 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 PRR20BP86481 221 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 PRR20AP86496 221 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 NR1H3Q13133 447 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 PABPC4Q13310 644 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTPA-211ENST00000417504 RGMBQ6NW40 437 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 PRRT2Q7Z6L0 340 aaPredicted RBP9.37□□□□□ -0.91
PTPA-211ENST00000417504 SAPCD2Q86UD0 394 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 FAM160B2Q86V87 743 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
PTPA-211ENST00000417504 STAG2Q8N3U4 1231 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 CCDC82Q8N4S0 544 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 NSUN7Q8NE18 718 aaKnown RBP9.37□□□□□ -0.91
PTPA-211ENST00000417504 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 CHURC1Q8WUH1 139 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 PIBF1Q8WXW3 757 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 WASF1Q92558 559 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 PHKBQ93100 1093 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 RRP36Q96EU6 259 aaKnown RBP9.37□□□□□ -0.91
PTPA-211ENST00000417504 DDX11Q96FC9 970 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 C12orf42Q96LP6 360 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 SPZ1Q9BXG8 430 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 C1QTNF2Q9BXJ5 285 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
PTPA-211ENST00000417504 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
PTPA-211ENST00000417504 CASP8AP2Q9UKL3 1982 aa9.37□□□□□ -0.91
PTPA-211ENST00000417504 SMCHD1A6NHR9 2005 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 PLXNB2O15031 1838 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 CCL15-CCL14A0A0B4J2E2 113 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 PALM3A6NDB9 673 aaPredicted RBP9.36□□□□□ -0.91
PTPA-211ENST00000417504 A6NJR5 290 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 DEXIO95424 95 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 CETPP11597 493 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 XBP1P17861 261 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 GJB2P29033 226 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 GRM1Q13255 1194 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 DGKZQ13574 1117 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 TRIM29Q14134 588 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 CCL15Q16663 113 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 SYDE2Q5VT97 1194 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 FASTKD5Q7L8L6 764 aaKnown RBP9.36□□□□□ -0.91
PTPA-211ENST00000417504 HOMER1Q86YM7 354 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 RASAL3Q86YV0 1011 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 SLF1Q9BQI6 1058 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 ORC3Q9UBD5 711 aaPredicted RBP9.36□□□□□ -0.91
PTPA-211ENST00000417504 FEM1BQ9UK73 627 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 KCNH4Q9UQ05 1017 aa9.36□□□□□ -0.91
PTPA-211ENST00000417504 THSD7BQ9C0I4 1608 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 PDCP20941 246 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 SLC16A2P36021 539 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
PTPA-211ENST00000417504 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 CDC37Q16543 378 aaPredicted RBP9.35□□□□□ -0.91
PTPA-211ENST00000417504 KIAA1755Q5JYT7 1200 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 SRBD1Q8N5C6 995 aaKnown RBP9.35□□□□□ -0.91
PTPA-211ENST00000417504 KIFC2Q96AC6 838 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 CPVLQ9H3G5 476 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 CWC22Q9HCG8 908 aaKnown RBP9.35□□□□□ -0.91
PTPA-211ENST00000417504 VAT1LQ9HCJ6 419 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 AGTPBP1Q9UPW5 1226 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 TCHHQ07283 1943 aa9.35□□□□□ -0.91
PTPA-211ENST00000417504 MGAMO43451 1857 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 VPS37CA5D8V6 355 aaPredicted RBP9.34□□□□□ -0.91
PTPA-211ENST00000417504 MANSC4A6NHS7 340 aaPredicted RBP9.34□□□□□ -0.91
PTPA-211ENST00000417504 H3BQV1 296 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 hCG_1984214I3L0E3 225 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 PRPF3O43395 683 aaKnown RBP9.34□□□□□ -0.91
PTPA-211ENST00000417504 CTDNEP1O95476 244 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 SMARCA1P28370 1054 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 SREBF2Q12772 1141 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 NTRK3Q16288 839 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 HEATR3Q7Z4Q2 680 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 TRMT44Q8IYL2 757 aaKnown RBP9.34□□□□□ -0.91
PTPA-211ENST00000417504 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 CYP4X1Q8N118 509 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 ZNF713Q8N859 430 aaPredicted RBP9.34□□□□□ -0.91
PTPA-211ENST00000417504 CCDC148Q8NFR7 591 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 SNIP1Q8TAD8 396 aaKnown RBP9.34□□□□□ -0.91
PTPA-211ENST00000417504 SMARCC2Q8TAQ2 1214 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 CCDC12Q8WUD4 166 aaPredicted RBP9.34□□□□□ -0.91
PTPA-211ENST00000417504 HHIPL1Q96JK4 782 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 C8orf76Q96K31 380 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 PIGSQ96S52 555 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 ALG1Q9BT22 464 aa9.34□□□□□ -0.91
PTPA-211ENST00000417504 PPP1R9AQ9ULJ8 1098 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms