RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CDK12Q9NYV4 1490 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 MCAMP43121 646 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 ANKRD42Q8N9B4 389 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 ANKRD36BP1Q96IX9 119 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 RGS12O14924 1447 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 BUB1BO60566 1050 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 RASSF7Q02833 373 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 CUL4BQ13620 913 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 EXOC3L4Q17RC7 722 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 GOLGA5Q8TBA6 731 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 LARP4BQ92615 738 aaKnown RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 AIFM3Q96NN9 605 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 ADCY8P40145 1251 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 CIAPIN1Q6FI81 312 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 LARSQ9P2J5 1176 aaKnown RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 SAR1BQ9Y6B6 198 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 PCP11498 1178 aaKnown RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 USP14P54578 494 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 CCNA1P78396 465 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 TAOK1Q7L7X3 1001 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 ARFGAP2Q8N6H7 521 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 UHMK1Q8TAS1 419 aaKnown RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 SKA2Q8WVK7 121 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 NUCKS1Q9H1E3 243 aaKnown RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 KIF9Q9HAQ2 790 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 KCNG1Q9UIX4 513 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 CIB2O75838 187 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 FAM26FQ5R3K3 315 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 GABPB2Q8TAK5 448 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-203ENST00000416123 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 HESX1Q9UBX0 185 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 ALKQ9UM73 1620 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 CYP2D6P10635 497 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 STMN2Q93045 179 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 RILPQ96NA2 401 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 KANSL2Q9H9L4 492 aa11.63□□□□□ -0.55
COL12A1-203ENST00000416123 SLC4A1P02730 911 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 ARHGEF2Q92974 986 aaKnown RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 NLRP4Q96MN2 994 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 TFAMQ00059 246 aaKnown RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 SDCCAG8Q86SQ7 713 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 DPH5Q9H2P9 285 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 LRFN2Q9ULH4 789 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 DDIT3P35638 169 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 C7orf31Q8N865 590 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 RETREG2Q8NC44 543 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 MASTLQ96GX5 879 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 FOXP1Q9H334 677 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 NR2F2P24468 414 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 BSDC1Q9NW68 430 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 NUB1Q9Y5A7 615 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 ITSN1Q15811 1721 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 IREB2P48200 963 aaKnown RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 HADHQ16836 314 aaKnown RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 FBXO18Q8NFZ0 1043 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 MESDQ14696 234 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 ANKRD13CQ8N6S4 541 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 ZNF277Q9NRM2 450 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 CDC37Q16543 378 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-203ENST00000416123 SCYL1Q96KG9 808 aa11.62□□□□□ -0.55
COL12A1-203ENST00000416123 GH2P01242 217 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 TFDP1Q14186 410 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 TDRD3Q9H7E2 651 aaKnown RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 TSTA3Q13630 321 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 SLC7A3Q8WY07 619 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 E9PCH4 1651 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 I3L4J1 428 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 SH2B2O14492 632 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 N4BP1O75113 896 aaKnown RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 CRKP46108 304 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 SASH1O94885 1247 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 PAK2Q13177 524 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 RAB17Q9H0T7 212 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 NXF1Q9UBU9 619 aaKnown RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 CAMSAP1Q5T5Y3 1602 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 SCARA5Q6ZMJ2 495 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 NSUN7Q8NE18 718 aaKnown RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 ZNF653Q96CK0 615 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 TUBGCP2Q9BSJ2 902 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 CCDC94Q9BW85 323 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 RNF26Q9BY78 433 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 SPATA31E1Q6ZUB1 1445 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 ECE2O60344 883 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 NMT2O60551 498 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 MYL3P08590 195 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms