RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 GPKOWQ92917 476 aaPredicted RBP eCLIP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 LZTS2Q9BRK4 669 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 C11orf49Q9H6J7 331 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 ACAD9Q9H845 621 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 VAT1LQ9HCJ6 419 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 DDX20Q9UHI6 824 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 NRBP1Q9UHY1 535 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 HTTP42858 3142 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 BTBD18B2RXH4 712 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 KBTBD13C9JR72 458 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 TPM2P07951 284 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 CCND3P30281 292 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 CYP2C19P33261 490 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 GPATCH4Q5T3I0 446 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 PAWRQ96IZ0 340 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 MAML3Q96JK9 1138 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 PIGSQ96S52 555 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 MPHOSPH6Q99547 160 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 RIOX1Q9H6W3 641 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 OGDHLQ9ULD0 1010 aa10.57□□□□□ -0.72
CHRNA1-206ENST00000416004 PFASO15067 1338 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 GOLGA6L22H0YM25 854 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 U2AF2P26368 475 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 NR5A1Q13285 461 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 WWC2Q6AWC2 1192 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 CCDC174Q6PII3 467 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 DIS3L2Q8IYB7 885 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 REPS2Q8NFH8 660 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 PHF20Q9BVI0 1012 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 JMJD4Q9H9V9 463 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 HOMER2Q9NSB8 354 aa10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 BAZ2BQ9UIF8 2168 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-206ENST00000416004 CENPFP49454 3210 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 STXBP3O00186 592 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 TRAK2O60296 914 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 COBLO75128 1261 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 PGK2P07205 417 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 ALAS1P13196 640 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 SMARCA1P28370 1054 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 KRT85P78386 507 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 HEATR3Q7Z4Q2 680 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 ADGRF4Q8IZF3 695 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 TRERF1Q96PN7 1200 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 USP28Q96RU2 1077 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 TINF2Q9BSI4 451 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 FLRT1Q9NZU1 646 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 CCPG1Q9ULG6 757 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 PRR12Q9ULL5 1215 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 TNRC18O15417 2968 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 FAM205CA6NFA0 338 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 B4DLN1 442 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 POTEB2H3BUK9 544 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 SEPT4O43236 478 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 PPP1R11O60927 126 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 RARBP10826 455 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 MRPL12P52815 198 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 EARS2Q5JPH6 523 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 BRAPQ7Z569 592 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 GPT2Q8TD30 523 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 LEO1Q8WVC0 666 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 PDCL3Q9H2J4 239 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 SPC25Q9HBM1 224 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 RNF146Q9NTX7 359 aa10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-206ENST00000416004 MYH6P13533 1939 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 SYNGAP1Q96PV0 1343 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 ASB14A6NK59 587 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 CYBAP13498 195 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 AKR1A1P14550 325 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 SAFBQ15424 915 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 ZNF792Q3KQV3 632 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 ZNF467Q7Z7K2 595 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 NOSTRINQ8IVI9 506 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 TNFRSF25Q93038 417 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 MTMR8Q96EF0 704 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 BARHL2Q9NY43 387 aa10.54□□□□□ -0.72
CHRNA1-206ENST00000416004 DNM1LO00429 736 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 ICAM1P05362 532 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 XBP1P17861 261 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 NLRP5P59047 1200 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 SNAP25P60880 206 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 TRAF1Q13077 416 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 GNL2Q13823 731 aaKnown RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 BTNL9Q6UXG8 535 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 RNF180Q86T96 592 aa10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 FOXP1Q9H334 677 aaPredicted RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 ADD3Q9UEY8 706 aaKnown RBP10.53□□□□□ -0.72
CHRNA1-206ENST00000416004 FAM184BQ9ULE4 1060 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms