RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
SCN1B-202ENST00000415950 HIP1RO75146 1068 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 PLCG1P19174 1290 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 CA8P35219 290 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 KIF11P52732 1056 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 PLTPP55058 493 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 PDE1CQ14123 709 aaPredicted RBP14.12□□□□□ -0.15
SCN1B-202ENST00000415950 MB21D1Q8N884 522 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 THOC1Q96FV9 657 aaKnown RBP14.12□□□□□ -0.15
SCN1B-202ENST00000415950 UFL1O94874 794 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 STAT1P42224 750 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 ADCY7P51828 1080 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 PPP2R5BQ15173 497 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 FAM133BQ5BKY9 247 aaKnown RBP14.12□□□□□ -0.15
SCN1B-202ENST00000415950 TTLL11Q8NHH1 800 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 TTLL3Q9Y4R7 772 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 ABCC3O15438 1527 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 MROH5Q6ZUA9 1318 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 HECW2Q9P2P5 1572 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 IQSEC2Q5JU85 1478 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 H7C1W4 665 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 CTNND1O60716 968 aaKnown RBP14.12□□□□□ -0.15
SCN1B-202ENST00000415950 BAG2O95816 211 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 SMTNP53814 917 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 MTMR3Q13615 1198 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 FAM26FQ5R3K3 315 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 ARMCX3Q9UH62 379 aaPredicted RBP14.12□□□□□ -0.15
SCN1B-202ENST00000415950 CRB1P82279 1406 aa14.12□□□□□ -0.15
SCN1B-202ENST00000415950 USP17L8P0C7I0 530 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 LIN9Q5TKA1 542 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 USP17L2Q6R6M4 530 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 TMC4Q7Z404 712 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 TPH2Q8IWU9 490 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 EYA3Q99504 573 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 GPR108Q9NPR9 543 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 HDAC9Q9UKV0 1011 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 RTCBQ9Y3I0 505 aaKnown RBP14.11□□□□□ -0.15
SCN1B-202ENST00000415950 LOC102724159A0A0B4J2E5 919 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 USP17L3A6NCW0 530 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 USP17L4A6NCW7 530 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 LIFRP42702 1097 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 EPHB4P54760 987 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 ITIH3Q06033 890 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 PWP2Q15269 919 aaKnown RBP14.11□□□□□ -0.15
SCN1B-202ENST00000415950 USP17L1Q7RTZ2 530 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 NEK8Q86SG6 692 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 VTI1AQ96AJ9 217 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 COA7Q96BR5 231 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 MADDQ8WXG6 1647 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 NR1D1P20393 614 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 ZBED6P86452 979 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 REXO1L1PQ8IX06 675 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 KLHL14Q9P2G3 628 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 PCDHA13Q9Y5I0 950 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 H2AFZP0C0S5 128 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 CYP2D6P10635 497 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 XRCC5P13010 732 aaKnown RBP14.11□□□□□ -0.15
SCN1B-202ENST00000415950 DHX9Q08211 1270 aaKnown RBP14.11□□□□□ -0.15
SCN1B-202ENST00000415950 CCDC14Q49A88 953 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 H2AFVQ71UI9 128 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 PNKPQ96T60 521 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 ANKRD2Q9GZV1 360 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 LY9Q9HBG7 655 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 TSKSQ9UJT2 592 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 KIAA1024Q9UPX6 916 aa14.11□□□□□ -0.15
SCN1B-202ENST00000415950 ARHGAP42A6NI28 874 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 TRPC3Q13507 836 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 MUM1Q2TAK8 710 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 WDR66Q8TBY9 1149 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 KAZALD1Q96I82 304 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 RWDD2AQ9UIY3 292 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 GNPATO15228 680 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 CLIC2O15247 247 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 GRM1Q13255 1194 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 PABPC4Q13310 644 aaKnown RBP eCLIP14.1□□□□□ -0.15
SCN1B-202ENST00000415950 TSGA10IPQ3SY00 556 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 RAB17Q9H0T7 212 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 MLXIPLQ9NP71 852 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 HOMER3Q9NSC5 361 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 MEIS1O00470 390 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 LRRN2O75325 713 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 EEF1GP26641 437 aaKnown RBP14.1□□□□□ -0.15
SCN1B-202ENST00000415950 LONP1P36776 959 aaKnown RBP14.1□□□□□ -0.15
SCN1B-202ENST00000415950 RPS8P62241 208 aaKnown RBP14.1□□□□□ -0.15
SCN1B-202ENST00000415950 GUCY1A3Q02108 690 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 SYCE1Q8N0S2 351 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 STAG1Q8WVM7 1258 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 NUF2Q9BZD4 464 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 PANK4Q9NVE7 773 aa14.1□□□□□ -0.15
SCN1B-202ENST00000415950 PRR16Q569H4 304 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 GBP7Q8N8V2 638 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-202ENST00000415950 TBCKQ8TEA7 893 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 LRRC1Q9BTT6 524 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 VCXQ9H320 206 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 NDST4Q9H3R1 872 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms