RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 RNF111Q6ZNA4 994 aa9.14□□□□□ -0.95
LINC00343-202ENST00000415294 AFAP1Q8N556 730 aa9.14□□□□□ -0.95
LINC00343-202ENST00000415294 ZNF518AQ6AHZ1 1483 aa9.14□□□□□ -0.95
LINC00343-202ENST00000415294 SYNMO15061 1565 aa9.14□□□□□ -0.95
LINC00343-202ENST00000415294 FAM135BQ49AJ0 1406 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 TMEM265A0A087WTH1 108 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 C2orf71A6NGG8 1288 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 MEIS1O00470 390 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 IRS4O14654 1257 aaPredicted RBP9.13□□□□□ -0.95
LINC00343-202ENST00000415294 ECI1P42126 302 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 SEPHS1P49903 392 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 IFI16Q16666 785 aaKnown RBP9.13□□□□□ -0.95
LINC00343-202ENST00000415294 DPY19L1Q2PZI1 675 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 GAB4Q2WGN9 574 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 IQCEQ6IPM2 695 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 THNSL2Q86YJ6 484 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 KSR1Q8IVT5 923 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 PPM1KQ8N3J5 372 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 CLUHP3Q96NS8 147 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 TRIM39Q9HCM9 518 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 NDOR1Q9UHB4 597 aa9.13□□□□□ -0.95
LINC00343-202ENST00000415294 NUP153P49790 1475 aaKnown RBP9.12□□□□□ -0.95
LINC00343-202ENST00000415294 CDK12Q9NYV4 1490 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-202ENST00000415294 A0A087X0B3 334 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 PLEKHD1A6NEE1 506 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 B4E1Z4 1266 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 STXBP3O00186 592 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 KCNAB2Q13303 367 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 SF1Q15637 639 aaKnown RBP9.12□□□□□ -0.95
LINC00343-202ENST00000415294 NKAPLQ5M9Q1 402 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 ZNF772Q68DY9 489 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-202ENST00000415294 FAM9AQ8IZU1 332 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-202ENST00000415294 SHISA5Q8N114 240 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 NPLOC4Q8TAT6 608 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 NETO1Q8TDF5 533 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-202ENST00000415294 SLC12A9Q9BXP2 914 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 PIM2Q9P1W9 311 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 MINPP1Q9UNW1 487 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 PLCH2O75038 1416 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 A2ML1A8K2U0 1454 aa9.12□□□□□ -0.95
LINC00343-202ENST00000415294 CYP26A1O43174 497 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 PDE8AO60658 829 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 NPTXRO95502 500 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 ASLP04424 464 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 POU3F2P20265 443 aaPredicted RBP9.11□□□□□ -0.95
LINC00343-202ENST00000415294 TPP2P29144 1249 aaPredicted RBP9.11□□□□□ -0.95
LINC00343-202ENST00000415294 AMPD3Q01432 767 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 NTRK3Q16288 839 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 C21orf62-AS1Q17RA5 79 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 CDKAL1Q5VV42 579 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 LRRTM3Q86VH5 581 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 AHI1Q8N157 1196 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 FAM181AQ8N9Y4 354 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 KREMEN2Q8NCW0 462 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 SLC7A14Q8TBB6 771 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 MAGEB10Q96LZ2 347 aaPredicted RBP9.11□□□□□ -0.95
LINC00343-202ENST00000415294 HSPA12BQ96MM6 686 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 SLC52A2Q9HAB3 445 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 GPR27Q9NS67 375 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 NPFFR2Q9Y5X5 522 aa9.11□□□□□ -0.95
LINC00343-202ENST00000415294 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.1□□□□□ -0.95
LINC00343-202ENST00000415294 SSU72P8A0A1W2PR75 194 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 GSG1L2A8MUP6 293 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 MEFVO15553 781 aaPredicted RBP9.1□□□□□ -0.95
LINC00343-202ENST00000415294 THBDP07204 575 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
LINC00343-202ENST00000415294 FLT3P36888 993 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 LTBRP36941 435 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 CYP4F3Q08477 520 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 BRAPQ7Z569 592 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 PPIL6Q8IXY8 311 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 USHBP1Q8N6Y0 703 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 FRS2Q8WU20 508 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 MCMBPQ9BTE3 642 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 DUSP13Q9UII6 198 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 TCFL5Q9UL49 500 aa9.1□□□□□ -0.95
LINC00343-202ENST00000415294 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
LINC00343-202ENST00000415294 XIRP1Q702N8 1843 aaKnown RBP9.1□□□□□ -0.95
LINC00343-202ENST00000415294 H3BS24 57 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 DYRK3O43781 588 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 SYPP08247 313 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 FOSL1P15407 271 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 CYP2R1Q6VVX0 501 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 USP53Q70EK8 1073 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.09□□□□□ -0.95
LINC00343-202ENST00000415294 DDX1Q92499 740 aaKnown RBP9.09□□□□□ -0.95
LINC00343-202ENST00000415294 UBE2FQ969M7 185 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 LRRC4CQ9HCJ2 640 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 SEMA3GQ9NS98 782 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
LINC00343-202ENST00000415294 ZSWIM5Q9P217 1185 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 PLAGL2Q9UPG8 496 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 PITPNM2Q9BZ72 1349 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 LRP6O75581 1613 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 ROBO1Q9Y6N7 1651 aa9.09□□□□□ -0.95
LINC00343-202ENST00000415294 DNAJC8O75937 253 aaPredicted RBP9.08□□□□□ -0.96
LINC00343-202ENST00000415294 IFNGR1P15260 489 aa9.08□□□□□ -0.96
LINC00343-202ENST00000415294 LTKP29376 864 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms