RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 AFF2P51816 1311 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 MPHOSPH10O00566 681 aaKnown RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 HERVK_113P62684 666 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 KRT71Q3SY84 523 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 NAP1L3Q99457 506 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 PLCB1Q9NQ66 1216 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 SH3GLB2Q9NR46 395 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 SLIT3O75094 1523 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 CCNT1O60563 726 aaKnown RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 RNASE9P60153 205 aaKnown RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 CUL1Q13616 776 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 ENAHQ8N8S7 591 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 P3H4Q92791 437 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 ATP6V1G3Q96LB4 118 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 EDEM3Q9BZQ6 932 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 SH2D4AQ9H788 454 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 A0A0U1RQJ8 604 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 USP17L12C9JPN9 530 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 USP17L21D6R901 530 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 RRP36Q96EU6 259 aaKnown RBP12.78□□□□□ -0.36
SCN4B-202ENST00000415030 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
SCN4B-202ENST00000415030 RHOBTB3O94955 611 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 HSPA1LP34931 641 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 BIRC3Q13489 604 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 NAA25Q14CX7 972 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 INF2Q27J81 1249 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 PARP10Q53GL7 1025 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 SYCE1Q8N0S2 351 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 SELENOSQ9BQE4 189 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.36
SCN4B-202ENST00000415030 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.36
SCN4B-202ENST00000415030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.77□□□□□ -0.36
SCN4B-202ENST00000415030 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.37
SCN4B-202ENST00000415030 NT5C2P49902 561 aa12.77□□□□□ -0.37
SCN4B-202ENST00000415030 BCAMP50895 628 aa12.77□□□□□ -0.37
SCN4B-202ENST00000415030 PRPF4BQ13523 1007 aaKnown RBP12.77□□□□□ -0.37
SCN4B-202ENST00000415030 PPP2R5EQ16537 467 aa12.77□□□□□ -0.37
SCN4B-202ENST00000415030 PFKFB3Q16875 520 aaPredicted RBP12.77□□□□□ -0.37
SCN4B-202ENST00000415030 FIGNQ5HY92 759 aa12.77□□□□□ -0.37
SCN4B-202ENST00000415030 AENQ8WTP8 325 aaKnown RBP12.77□□□□□ -0.37
SCN4B-202ENST00000415030 MLXIPQ9HAP2 919 aa12.77□□□□□ -0.37
SCN4B-202ENST00000415030 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
SCN4B-202ENST00000415030 BAG3O95817 575 aa12.77□□□□□ -0.37
SCN4B-202ENST00000415030 KCNK3O14649 394 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 PLCB4Q15147 1175 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 CCDC65Q8IXS2 484 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 EEF2KMTQ96G04 330 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 RIC8AQ9NPQ8 531 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 AGPAT5Q9NUQ2 364 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 PRPF6O94906 941 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 EPB41P11171 864 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 LSP1P33241 339 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 SKOR1P84550 965 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 LRRC63Q05C16 580 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 CLUL1Q15846 466 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 KDM7AQ6ZMT4 941 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 CAVIN3Q969G5 261 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 CCSER1Q9C0I3 900 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 CNOT10Q9H9A5 744 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 KLC4Q9NSK0 619 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 FLOT1O75955 427 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 MDH1P40925 334 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 EHHADHQ08426 723 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 GIMAP8Q8ND71 665 aaPredicted RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 ZNF473Q8WTR7 871 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 PBKQ96KB5 322 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 ERGIC2Q96RQ1 377 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 RAB17Q9H0T7 212 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 MTRF1LQ9UGC7 380 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 BUB1BO60566 1050 aaPredicted RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 SERPING1P05155 500 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 LDHCP07864 332 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 KCNQ4P56696 695 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 MEA1Q16626 185 aa12.76□□□□□ -0.37
SCN4B-202ENST00000415030 SEPT11Q9NVA2 429 aaKnown RBP12.76□□□□□ -0.37
SCN4B-202ENST00000415030 SHOX2O60902 331 aaPredicted RBP12.75□□□□□ -0.37
SCN4B-202ENST00000415030 NBPF9Q3BBW0 867 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 WDR78Q5VTH9 848 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 PPP4R3AQ6IN85 833 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 SLF2Q8IX21 1173 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 MYOCDQ8IZQ8 938 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 ZIM3Q96PE6 472 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 LSM14BQ9BX40 385 aaKnown RBP12.75□□□□□ -0.37
SCN4B-202ENST00000415030 STK17AQ9UEE5 414 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 PLAAQ9Y263 795 aa12.75□□□□□ -0.37
SCN4B-202ENST00000415030 RIMBP2O15034 1052 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms