RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 DOCK1Q14185 1865 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 LAMB1P07942 1786 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 GOLIM4O00461 696 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 FBXO24O75426 580 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 IDH1O75874 414 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 MAP4K4O95819 1239 aaPredicted RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 PSAPP07602 524 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 MAPTP10636 758 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 NF2P35240 595 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 EIF4A3P38919 411 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 BTDP43251 543 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 SMCPP49901 116 aaPredicted RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 MMP14P50281 582 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 ZNF157P51786 506 aaPredicted RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 DYNLL1P63167 89 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 HYAL2Q12891 473 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 PICALMQ13492 652 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 LAMC2Q13753 1193 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 MAP3K11Q16584 847 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 SLC4A8Q2Y0W8 1093 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 COL13A1Q5TAT6 717 aaPredicted RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 SPTY2D1Q68D10 685 aaPredicted RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 HHIPL2Q6UWX4 724 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 ADGRA1Q86SQ6 560 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 CCNJLQ8IV13 435 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 ZFPM1Q8IX07 1006 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 ZGPATQ8N5A5 531 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 RASGRP4Q8TDF6 673 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 OTUD7AQ8TE49 926 aaPredicted RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 NSUN4Q96CB9 384 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 SEC16BQ96JE7 1060 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 ZKSCAN3Q9BRR0 538 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 BOLA2Q9H3K6 86 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 DCTPP1Q9H773 170 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 ZSWIM4Q9H7M6 989 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 TMOD2Q9NZR1 351 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 SUGT1Q9Y2Z0 365 aa5.91□□□□□ -1.46
VPS41-205ENST00000414632 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 PDS5AQ29RF7 1337 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 DDX60LQ5H9U9 1706 aaKnown RBP5.91□□□□□ -1.46
VPS41-205ENST00000414632 PHIPQ8WWQ0 1821 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 FAM155AB1AL88 458 aaPredicted RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 TRPA1O75762 1119 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 MAP3K6O95382 1288 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 CHGBP05060 677 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 HSPA1AP0DMV8 641 aaKnown RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 HSPA1BP0DMV9 641 aaKnown RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 ACPPP15309 386 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 RGS3P49796 1198 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 SPEM2Q0P670 501 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 TNFAIP1Q13829 316 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 UBAP2LQ14157 1087 aaKnown RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 NAA16Q6N069 864 aaPredicted RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 RGMBQ6NW40 437 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 SV2BQ7L1I2 683 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 MIGA2Q7L4E1 593 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 RASAL3Q86YV0 1011 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 MAGEB6Q8N7X4 407 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 MIGA1Q8NAN2 632 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 SH3RF3Q8TEJ3 882 aaPredicted RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 ZNF296Q8WUU4 475 aaPredicted RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 CLMNQ96JQ2 1002 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 TEPSINQ96N21 525 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 CNTNAP3BQ96NU0 1288 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 CNTNAP3Q9BZ76 1288 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 NUCKS1Q9H1E3 243 aaKnown RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 DDX4Q9NQI0 724 aaKnown RBP5.9□□□□□ -1.46
VPS41-205ENST00000414632 DZANK1Q9NVP4 752 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 AATFQ9NY61 560 aaKnown RBP eCLIP5.9□□□□□ -1.46
VPS41-205ENST00000414632 MARK1Q9P0L2 795 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 HCN2Q9UL51 889 aa5.9□□□□□ -1.46
VPS41-205ENST00000414632 GAKO14976 1311 aa5.9□□□□□ -1.47
VPS41-205ENST00000414632 PTPRFP10586 1907 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 CASP8AP2Q9UKL3 1982 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 AXIN1O15169 862 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 BNIP3LO60238 219 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 USP2O75604 605 aaPredicted RBP5.89□□□□□ -1.47
VPS41-205ENST00000414632 WDHD1O75717 1129 aaPredicted RBP5.89□□□□□ -1.47
VPS41-205ENST00000414632 KIF4AO95239 1232 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 IGHDP01880 384 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 CYP7A1P22680 504 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 SOX18P35713 384 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 ECE1P42892 770 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 RHBDL3P58872 404 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 GSTO1P78417 241 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 KIF23Q02241 960 aaPredicted RBP5.89□□□□□ -1.47
VPS41-205ENST00000414632 PLAURQ03405 335 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 DBN1Q16643 649 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 SPRED3Q2MJR0 410 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 SUPT20HL1Q3ZLR7 823 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 ANKRD45Q5TZF3 282 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 ARMC9Q7Z3E5 817 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 MAPKAPK5Q8IW41 473 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 TEX11Q8IYF3 940 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 CEP120Q8N960 986 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 JMYQ8N9B5 988 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 PHC3Q8NDX5 983 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 BHMTQ93088 406 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 EAF1Q96JC9 268 aaPredicted RBP5.89□□□□□ -1.47
VPS41-205ENST00000414632 ZNF512BQ96KM6 892 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms