RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ATF7P17544 494 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ATF3P18847 181 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 IL4RP24394 825 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 MAPK1P28482 360 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ALDH1B1P30837 517 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 UBA7P41226 1012 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 MASP1P48740 699 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ZNF157P51786 506 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 KRT83P78385 493 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ROR1Q01973 937 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 PTPN12Q05209 780 aaKnown RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 PDE1CQ14123 709 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SMC1AQ14683 1233 aaKnown RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 LRRC41Q15345 812 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 TTF1Q15361 905 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 PTPN14Q15678 1187 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 TTC31Q49AM3 519 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 DACT2Q5SW24 774 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 PLBD1Q6P4A8 553 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SEZ6L2Q6UXD5 910 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 KIAA0907Q7Z7F0 614 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ERC1Q8IUD2 1116 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 OR8H2Q8N162 312 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 GIMAP8Q8ND71 665 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 STK35Q8TDR2 534 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ATXN2LQ8WWM7 1075 aaKnown RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SH3KBP1Q96B97 665 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SETDB2Q96T68 719 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 OSBPL5Q9H0X9 879 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 SEMA6CQ9H3T2 930 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 CCDC86Q9H6F5 360 aaKnown RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 ACSS3Q9H6R3 686 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 EPB41L4AQ9HCS5 686 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 BRMS1Q9HCU9 246 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 TMOD4Q9NZQ9 345 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 DCTN4Q9UJW0 460 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 GTF3C4Q9UKN8 822 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 PPP1R9AQ9ULJ8 1098 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 INPP5FQ9Y2H2 1132 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 RRP15Q9Y3B9 282 aaKnown RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 PCDHGC5Q9Y5F6 944 aa4.21□□□□□ -1.74
SF3B1-203ENST00000414174 DDX49Q9Y6V7 483 aaKnown RBP4.21□□□□□ -1.74
SF3B1-203ENST00000414174 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CCDC196A0A1B0GTZ2 297 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 C9IYK1 514 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 SGTAO43765 313 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CAPN2P17655 700 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 KCNA6P17658 529 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CDKN1CP49918 316 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CTSWP56202 376 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 UBASH3AP57075 661 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 SESN3P58005 492 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 SARNPP82979 210 aaKnown RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 PRKCQQ04759 706 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 TRDNQ13061 729 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 MYBPC3Q14896 1274 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 SLMAPQ14BN4 828 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 WTAPQ15007 396 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 MLANAQ16655 118 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 MUM1Q2TAK8 710 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CYP27C1Q4G0S4 372 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 RPS26P11Q5JNZ5 115 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 AKAP4Q5JQC9 854 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 LRCH2Q5VUJ6 765 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CDCA2Q69YH5 1023 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 UNC5DQ6UXZ4 953 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CYP26C1Q6V0L0 522 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 KSR2Q6VAB6 950 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 DBX2Q6ZNG2 339 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 MMS22LQ6ZRQ5 1243 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CCDC129Q6ZRS4 1044 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 MCM10Q7L590 875 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 C14orf80Q86SX3 495 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 PDZD3Q86UT5 571 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 ZSWIM9Q86XI8 627 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CCDC144CPQ8IYA2 1237 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 ZNF713Q8N859 430 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 ANKRD42Q8N9B4 389 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 TTC8Q8TAM2 541 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 UHMK1Q8TAS1 419 aaKnown RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 NETO1Q8TDF5 533 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 MAML1Q92585 1016 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CEP95Q96GE4 821 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 DMRTB1Q96MA1 342 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 UROC1Q96N76 676 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 KIF2CQ99661 725 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 PRKRIP1Q9H875 184 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 C1GALT1Q9NS00 363 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 FANCLQ9NW38 375 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 QPCTLQ9NXS2 382 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 C9orf78Q9NZ63 289 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 C6orf203Q9P0P8 240 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 PNMA8BQ9ULN7 279 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-203ENST00000414174 CEP131Q9UPN4 1083 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 SQORQ9Y6N5 450 aa4.2□□□□□ -1.74
SF3B1-203ENST00000414174 KLRG2A4D1S0 409 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 A6NCN8 305 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 TMPRSS2O15393 492 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 TREHO43280 583 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms