RNA–Protein interactions for RNA: ENST00000414034.7

GHDC-202, Transcript of GH3 domain containing, humanhuman

TSL 2 BASIC

Gene GHDC, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-202ENST00000414034 XRCC4Q13426 336 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 NBPF9Q3BBW0 867 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 ZSCAN29Q8IWY8 852 aaPredicted RBP19.2■□□□□ 0.66
GHDC-202ENST00000414034 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.2■□□□□ 0.66
GHDC-202ENST00000414034 ISCA1Q9BUE6 129 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 KIF3CO14782 793 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 HSPA9P38646 679 aaKnown RBP19.2■□□□□ 0.66
GHDC-202ENST00000414034 SCTRP47872 440 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 E2F5Q15329 346 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 NPY5RQ15761 445 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 LACTB2Q53H82 288 aaPredicted RBP19.2■□□□□ 0.66
GHDC-202ENST00000414034 KLHDC7AQ5VTJ3 777 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 TLDC1Q6P9B6 456 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 PIK3AP1Q6ZUJ8 805 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 CACNA2D3Q8IZS8 1091 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 RNF10Q8N5U6 811 aaKnown RBP19.2■□□□□ 0.66
GHDC-202ENST00000414034 CASKIN2Q8WXE0 1202 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 PLCB1Q9NQ66 1216 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 TNKSO95271 1327 aa19.2■□□□□ 0.66
GHDC-202ENST00000414034 CYP27B1O15528 508 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 PHKA1P46020 1223 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 CDC37Q16543 378 aaPredicted RBP19.19■□□□□ 0.66
GHDC-202ENST00000414034 MIIPQ5JXC2 388 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 RASSF8Q8NHQ8 419 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 EEF2KMTQ96G04 330 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 SEC16BQ96JE7 1060 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 PLA2G12BQ9BX93 195 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 RBM28Q9NW13 759 aaKnown RBP19.19■□□□□ 0.66
GHDC-202ENST00000414034 KLRC4O43908 158 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 GBP2P32456 591 aaPredicted RBP19.19■□□□□ 0.66
GHDC-202ENST00000414034 SEC23AQ15436 765 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 TTLL11Q8NHH1 800 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 P2RX5Q93086 422 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 CNNM1Q9NRU3 951 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 SLC12A6Q9UHW9 1150 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 SPATA31A3Q5VYP0 1347 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 MYH10P35580 1976 aa19.19■□□□□ 0.66
GHDC-202ENST00000414034 GRID2IPA4D2P6 1211 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 PRKAB2O43741 272 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 PCCAP05165 728 aaPredicted RBP19.18■□□□□ 0.66
GHDC-202ENST00000414034 CCNE1P24864 410 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 FAM89AQ96GI7 184 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 KRT12Q99456 494 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 SALL4Q9UJQ4 1053 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 LEMD3Q9Y2U8 911 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 SLC4A4Q9Y6R1 1079 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 MGRN1O60291 552 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 RTN2O75298 545 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 SLC8A3P57103 927 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 BIRC3Q13489 604 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 SPRED3Q2MJR0 410 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 CATIPQ7Z7H3 387 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 ESR2Q92731 530 aa19.18■□□□□ 0.66
GHDC-202ENST00000414034 AHDC1Q5TGY3 1603 aaPredicted RBP19.18■□□□□ 0.66
GHDC-202ENST00000414034 MEGF6O75095 1541 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 C5orf60A6NFR6 353 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 PLEKHA8P1O95397 391 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 IRX1P78414 480 aaPredicted RBP19.17■□□□□ 0.66
GHDC-202ENST00000414034 RUFY4Q6ZNE9 571 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 ANKRD13CQ8N6S4 541 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 MTMR8Q96EF0 704 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 RSRC1Q96IZ7 334 aaKnown RBP19.17■□□□□ 0.66
GHDC-202ENST00000414034 GLI3P10071 1580 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 BRD2P25440 801 aaKnown RBP19.17■□□□□ 0.66
GHDC-202ENST00000414034 NAA25Q14CX7 972 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 QPCTQ16769 361 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
GHDC-202ENST00000414034 GKAP1Q5VSY0 366 aaPredicted RBP19.17■□□□□ 0.66
GHDC-202ENST00000414034 EIF1ADQ8N9N8 165 aaKnown RBP19.17■□□□□ 0.66
GHDC-202ENST00000414034 TAF1DQ9H5J8 278 aaPredicted RBP19.17■□□□□ 0.66
GHDC-202ENST00000414034 BUB1O43683 1085 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 DNAJC8O75937 253 aaPredicted RBP19.16■□□□□ 0.66
GHDC-202ENST00000414034 ECM2O94769 699 aaPredicted RBP19.16■□□□□ 0.66
GHDC-202ENST00000414034 NLRP5P59047 1200 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 RASSF7Q02833 373 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 ODF2Q5BJF6 829 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 ANKRD40Q6AI12 368 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 CCDC47Q96A33 483 aaKnown RBP19.16■□□□□ 0.66
GHDC-202ENST00000414034 KDM4CQ9H3R0 1056 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
GHDC-202ENST00000414034 PDE8BO95263 885 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 ITGA6P23229 1130 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 TNNC1P63316 161 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 MSL1Q68DK7 614 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 VGLL2Q8N8G2 317 aa19.16■□□□□ 0.66
GHDC-202ENST00000414034 FAM207AQ9NSI2 230 aaPredicted RBP19.16■□□□□ 0.66
GHDC-202ENST00000414034 FRMD3A2A2Y4 597 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 GHRP10912 638 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 HSD17B3P37058 310 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 PPP1R2P41236 205 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 HLTFQ14527 1009 aaKnown RBP eCLIP19.15■□□□□ 0.66
GHDC-202ENST00000414034 ZKSCAN8Q15776 578 aaPredicted RBP19.15■□□□□ 0.66
GHDC-202ENST00000414034 SPATA5Q8NB90 893 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 LRRC45Q96CN5 670 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 HOOK2Q96ED9 719 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 SLC24A3Q9HC58 644 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 KBTBD4Q9NVX7 518 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 MYH2Q9UKX2 1941 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
GHDC-202ENST00000414034 RPSAP08865 295 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms