RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 TMTC2Q8N394 836 aa30.52■■■□□ 2.48
VEGFA-207ENST00000413642 BADQ92934 168 aa30.52■■■□□ 2.48
VEGFA-207ENST00000413642 MAP3K14Q99558 947 aa30.52■■■□□ 2.48
VEGFA-207ENST00000413642 ARIH2O95376 493 aa30.51■■■□□ 2.47
VEGFA-207ENST00000413642 ARHGEF16Q5VV41 709 aa30.51■■■□□ 2.47
VEGFA-207ENST00000413642 ANKRD33Q7Z3H0 272 aa30.51■■■□□ 2.47
VEGFA-207ENST00000413642 B4DLN1 442 aa30.5■■■□□ 2.47
VEGFA-207ENST00000413642 KIF5BP33176 963 aa30.5■■■□□ 2.47
VEGFA-207ENST00000413642 MRPL12P52815 198 aaKnown RBP30.5■■■□□ 2.47
VEGFA-207ENST00000413642 EXOSC10Q01780 885 aaKnown RBP30.5■■■□□ 2.47
VEGFA-207ENST00000413642 GHRHRQ02643 423 aa30.5■■■□□ 2.47
VEGFA-207ENST00000413642 SEPT14Q6ZU15 432 aa30.5■■■□□ 2.47
VEGFA-207ENST00000413642 TDHQ8IZJ6 230 aa30.5■■■□□ 2.47
VEGFA-207ENST00000413642 SRBD1Q8N5C6 995 aaKnown RBP30.5■■■□□ 2.47
VEGFA-207ENST00000413642 SCFD2Q8WU76 684 aa30.5■■■□□ 2.47
VEGFA-207ENST00000413642 A0A0U1RQG5 324 aaPredicted RBP30.49■■■□□ 2.47
VEGFA-207ENST00000413642 ARVCFO00192 962 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 TXNP10599 105 aaKnown RBP30.49■■■□□ 2.47
VEGFA-207ENST00000413642 PSMC6P62333 389 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 PPP2R5BQ15173 497 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 TSGA10IPQ3SY00 556 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 OR6J1Q8NGC5 347 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 LRCH3Q96II8 777 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 TOX2Q96NM4 488 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 SPZ1Q9BXG8 430 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 PXMP2Q9NR77 195 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 TMEM39AQ9NV64 488 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 SLC12A7Q9Y666 1083 aa30.49■■■□□ 2.47
VEGFA-207ENST00000413642 GRIN2DO15399 1336 aa30.48■■■□□ 2.47
VEGFA-207ENST00000413642 DCDC2CA8MYV0 355 aa30.48■■■□□ 2.47
VEGFA-207ENST00000413642 KIAA0355O15063 1070 aa30.47■■■□□ 2.47
VEGFA-207ENST00000413642 ZEB2O60315 1214 aa30.47■■■□□ 2.47
VEGFA-207ENST00000413642 NR3C2P08235 984 aa30.47■■■□□ 2.47
VEGFA-207ENST00000413642 STXBP2Q15833 593 aa30.47■■■□□ 2.47
VEGFA-207ENST00000413642 DHX32Q7L7V1 743 aaKnown RBP30.47■■■□□ 2.47
VEGFA-207ENST00000413642 RRP36Q96EU6 259 aaKnown RBP30.47■■■□□ 2.47
VEGFA-207ENST00000413642 IWS1Q96ST2 819 aa30.47■■■□□ 2.47
VEGFA-207ENST00000413642 PPP4R2Q9NY27 417 aa30.47■■■□□ 2.47
VEGFA-207ENST00000413642 RANBP2P49792 3224 aaKnown RBP30.46■■■□□ 2.47
VEGFA-207ENST00000413642 GCOM1H8Y6P7 765 aaPredicted RBP30.46■■■□□ 2.47
VEGFA-207ENST00000413642 POLR2MP0CAP2 368 aa30.46■■■□□ 2.47
VEGFA-207ENST00000413642 CPA1P15085 419 aa30.46■■■□□ 2.47
VEGFA-207ENST00000413642 CCDC62Q6P9F0 684 aa30.46■■■□□ 2.47
VEGFA-207ENST00000413642 SGMS1Q86VZ5 419 aa30.46■■■□□ 2.47
VEGFA-207ENST00000413642 FCHSD1Q86WN1 690 aa30.46■■■□□ 2.47
VEGFA-207ENST00000413642 CCDC82Q8N4S0 544 aa30.46■■■□□ 2.47
VEGFA-207ENST00000413642 ZFP91Q96JP5 570 aaPredicted RBP30.46■■■□□ 2.47
VEGFA-207ENST00000413642 BRPF3Q9ULD4 1205 aa30.46■■■□□ 2.47
VEGFA-207ENST00000413642 hCG_1642624A0A1W2PR95 340 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 CABYRO75952 493 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 MYL3P08590 195 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 ITGA7Q13683 1181 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 TTLL4Q14679 1199 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 LY6KQ17RY6 165 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 MICU3Q86XE3 530 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 FAM126BQ8IXS8 530 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 FANCBQ8NB91 859 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 SLC43A3Q8NBI5 491 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 IL31RAQ8NI17 732 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 LZTS2Q9BRK4 669 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 PDCD2LQ9BRP1 358 aa30.45■■■□□ 2.47
VEGFA-207ENST00000413642 DNAH12Q6ZR08 3092 aa30.45■■■□□ 2.46
VEGFA-207ENST00000413642 CALM1P0DP23 149 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 CALM2P0DP24 149 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 CALM3P0DP25 149 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 MYCLP12524 364 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-207ENST00000413642 RAG1P15918 1043 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 SMARCA1P28370 1054 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 GNAQP50148 359 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 TRAF1Q13077 416 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 KCNB2Q92953 911 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 MAP3K20Q9NYL2 800 aaKnown RBP30.44■■■□□ 2.46
VEGFA-207ENST00000413642 TBX21Q9UL17 535 aa30.44■■■□□ 2.46
VEGFA-207ENST00000413642 NKRFO15226 690 aaKnown RBP eCLIP30.43■■■□□ 2.464e-7■□□□□ 10.1
VEGFA-207ENST00000413642 HSPA4P34932 840 aa30.43■■■□□ 2.46
VEGFA-207ENST00000413642 PPP1R13LQ8WUF5 828 aa30.43■■■□□ 2.46
VEGFA-207ENST00000413642 SNX14Q9Y5W7 946 aa30.43■■■□□ 2.46
VEGFA-207ENST00000413642 EIF3JO75822 258 aaKnown RBP30.42■■■□□ 2.46
VEGFA-207ENST00000413642 CPT1AP50416 773 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 EPHB4P54760 987 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 PURAQ00577 322 aaKnown RBP30.42■■■□□ 2.46
VEGFA-207ENST00000413642 KRT32Q14532 448 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 PGM5Q15124 567 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 C9orf50Q5SZB4 431 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 APOA5Q6Q788 366 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 TMTC3Q6ZXV5 915 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 SAMD3Q8N6K7 520 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 LTBP2Q14767 1821 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 BAZ2BQ9UIF8 2168 aaKnown RBP30.42■■■□□ 2.46
VEGFA-207ENST00000413642 MROH7Q68CQ1 1323 aa30.42■■■□□ 2.46
VEGFA-207ENST00000413642 RGS20O76081 388 aa30.41■■■□□ 2.46
VEGFA-207ENST00000413642 SHHQ15465 462 aa30.41■■■□□ 2.46
VEGFA-207ENST00000413642 JAKMIP1Q96N16 626 aaKnown RBP30.41■■■□□ 2.46
VEGFA-207ENST00000413642 POLR3EQ9NVU0 708 aa30.41■■■□□ 2.46
VEGFA-207ENST00000413642 SEC63Q9UGP8 760 aaKnown RBP30.41■■■□□ 2.46
VEGFA-207ENST00000413642 A6NJR5 290 aa30.4■■■□□ 2.46
VEGFA-207ENST00000413642 CD4P01730 458 aa30.4■■■□□ 2.46
VEGFA-207ENST00000413642 ARHGAP1Q07960 439 aa30.4■■■□□ 2.46
VEGFA-207ENST00000413642 LRIT3Q3SXY7 679 aa30.4■■■□□ 2.46
VEGFA-207ENST00000413642 SYNE3Q6ZMZ3 975 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms